D. rerio Gene: fermt1 - ENSDARG00000052652 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052652
Namefermt1
Descriptionfermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
OrganismDanio rerio (zebrafish)
Synonym(s)fc32b07, kindlin-1, si:ch73-22c10.1, wu:fc32b07

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
2.69e3
  • 2.69e3
  • 3.57e3
  • 4.29e3
  • 4.80e3
  • 1.16e4
90.99
  • 90.99
  • 88.03
  • 85.63
  • 83.94
  • 61.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.43
  • 83.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.35
  • 80.35
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.99e3
  • 5.99e3
  • 1.28e4
79.95
  • 79.95
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.53e3
  • 6.53e3
  • 9.65e3
78.14
  • 78.14
  • 67.68
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.67
  • 71.67
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
70.56
  • 70.56
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.94
  • 67.94
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.68
  • 67.68
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.91e3
  • 9.91e3
  • 1.69e4
66.81
  • 66.81
  • 43.27
AEIR
  • AEIR
  • AEIR
UBERON:2005317pectoral fin fold
  • ZFS:0000035Larval:Protruding-mouth
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0005419pectoral appendage bud
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.66
  • 66.66
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.10e4
  • 1.10e4
63.26
  • 63.26
AEIR
  • AEIR
UBERON:2000040median fin fold
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.12e4
  • 1.12e4
  • 1.38e4
62.50
  • 62.50
  • 53.83
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.18e4
  • 1.18e4
  • 1.23e4
60.36
  • 60.36
  • 58.67
AEIR
  • AEIR
  • AEIR
UBERON:0005497non-neural ectoderm
  • ZFS:0000020Gastrula:75%-epiboly
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.11
  • 55.11
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.80
  • 54.80
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
1.36e4
  • 1.36e4
  • 1.40e4
54.53
  • 54.53
  • 53.10
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.41e4
  • 1.41e4
52.86
  • 52.86
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
  • 1.78e4
51.01
  • 51.01
  • 40.43
AEIR
  • AEIR
  • AEIR
UBERON:0001277intestinal epithelium
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.75
  • 49.75
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.59
  • 46.59
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.88
  • 39.88
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.25
  • 34.25
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

Do not show this banner again