D. rerio Gene: arrdc3a - ENSDARG00000052690 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052690
Namearrdc3a
Descriptionarrestin domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2913]
OrganismDanio rerio (zebrafish)
Synonym(s)arrdc3, arrdc3 {eco:0000313|embl:aai17668.1,gn eco:0000313|zfin:zdb-gene-030131-2913}, si:dkey-172m14.3, wu:fc21e01, zgc:136956

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
720
  • 720
  • 2.92e3
97.59
  • 97.59
  • 90.23
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
769
  • 769
97.43
  • 97.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
895
  • 895
97.01
  • 97.01
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.54
  • 96.54
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.43
  • 96.43
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.37
  • 96.37
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.21e3
  • 1.21e3
  • 1.48e3
95.94
  • 95.94
  • 95.06
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.47
  • 95.47
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
1.65e3
  • 1.65e3
  • 4.70e3
  • 4.82e3
  • 5.06e3
  • 6.12e3
  • 6.47e3
  • 6.65e3
  • 7.27e3
  • 8.26e3
  • 1.16e4
94.48
  • 94.48
  • 84.26
  • 83.87
  • 83.06
  • 79.51
  • 78.35
  • 77.72
  • 75.67
  • 72.35
  • 61.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
1.82e3
  • 1.82e3
  • 4.87e3
  • 1.45e4
93.90
  • 93.90
  • 83.69
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.91e3
  • 1.91e3
93.59
  • 93.59
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
2.35e3
  • 2.35e3
  • 2.62e3
  • 4.61e3
  • 5.79e3
92.13
  • 92.13
  • 91.24
  • 84.57
  • 80.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.67e3
  • 2.67e3
91.08
  • 91.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.67
  • 90.67
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.05e3
  • 3.05e3
  • 5.29e3
  • 6.43e3
89.78
  • 89.78
  • 82.29
  • 78.46
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.23e3
  • 3.23e3
89.19
  • 89.19
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
89.15
  • 89.15
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.32e3
  • 4.32e3
85.53
  • 85.53
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.82e3
  • 4.82e3
  • 7.17e3
83.88
  • 83.88
  • 75.99
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
6.80e3
  • 6.80e3
  • 8.14e3
  • 8.70e3
  • 9.64e3
  • 1.03e4
  • 1.07e4
  • 1.07e4
  • 1.09e4
  • 1.10e4
  • 1.10e4
  • 1.11e4
  • 1.13e4
  • 1.14e4
  • 1.39e4
  • 1.46e4
  • 1.50e4
77.23
  • 77.23
  • 72.76
  • 70.87
  • 67.74
  • 65.66
  • 64.20
  • 64.10
  • 63.40
  • 63.16
  • 63.03
  • 62.83
  • 62.17
  • 61.80
  • 53.30
  • 51.01
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
7.66e3
  • 7.66e3
  • 7.97e3
  • 8.23e3
  • 8.73e3
  • 9.13e3
  • 1.16e4
74.37
  • 74.37
  • 73.32
  • 72.43
  • 70.78
  • 69.45
  • 61.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.93e3
  • 7.93e3
73.46
  • 73.46
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.20e3
  • 8.20e3
72.55
  • 72.55
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.41
  • 72.41
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.14e4
  • 1.14e4
61.88
  • 61.88
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.85
  • 59.85
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
1.28e4
  • 1.28e4
  • 1.30e4
  • 1.88e4
57.28
  • 57.28
  • 56.56
  • 36.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.69e4
  • 1.69e4
43.36
  • 43.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC117667, CR450818
EnsemblENSDARG00000052690 (arrdc3a)
Uniprot/SPTREMBLQ1ECU3, Q1ECU3_DANRE
ZFINZDB-GENE-030131-2913 (arrdc3a)

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