D. rerio Gene: fam172a - ENSDARG00000052697 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052697
Namefam172a
Descriptionfamily with sequence similarity 172, member A [Source:ZFIN;Acc:ZDB-GENE-040426-1396]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-172f14.1, zgc:64188

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.21
  • 94.21
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
1.95e3
  • 1.95e3
  • 4.70e3
  • 1.20e4
  • 1.23e4
  • 1.26e4
  • 1.26e4
  • 1.27e4
  • 1.28e4
  • 1.28e4
  • 1.28e4
  • 1.29e4
  • 1.31e4
  • 1.31e4
  • 1.33e4
93.48
  • 93.48
  • 84.28
  • 59.75
  • 58.78
  • 57.71
  • 57.70
  • 57.42
  • 57.20
  • 57.19
  • 57.03
  • 56.74
  • 56.10
  • 55.99
  • 55.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.29e3
  • 2.29e3
  • 3.33e3
  • 3.34e3
  • 3.56e3
  • 3.60e3
92.32
  • 92.32
  • 88.84
  • 88.83
  • 88.08
  • 87.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.38e3
  • 2.38e3
92.04
  • 92.04
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
82.17
  • 82.17
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.59e3
  • 5.59e3
81.29
  • 81.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.07e3
  • 6.07e3
79.69
  • 79.69
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.07e3
  • 6.07e3
79.67
  • 79.67
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.92
  • 78.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
6.54e3
  • 6.54e3
  • 7.21e3
  • 1.19e4
  • 1.26e4
  • 1.51e4
78.10
  • 78.10
  • 75.85
  • 60.09
  • 57.81
  • 49.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
6.84e3
  • 6.84e3
  • 9.49e3
  • 9.61e3
  • 1.34e4
77.11
  • 77.11
  • 68.24
  • 67.82
  • 55.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.39e3
  • 7.39e3
  • 9.42e3
75.26
  • 75.26
  • 68.47
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.52e3
  • 7.52e3
74.81
  • 74.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.47
  • 74.47
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.74e3
  • 7.74e3
  • 1.07e4
74.08
  • 74.08
  • 64.05
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
73.21
  • 73.21
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.03e3
  • 8.03e3
73.10
  • 73.10
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.56e3
  • 8.56e3
71.33
  • 71.33
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.73e3
  • 8.73e3
70.78
  • 70.78
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
  • 9.18e3
70.12
  • 70.12
  • 69.27
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.09e3
  • 9.09e3
69.55
  • 69.55
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.77e3
  • 9.77e3
67.28
  • 67.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.92e3
  • 9.92e3
66.78
  • 66.78
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
9.97e3
  • 9.97e3
  • 1.04e4
  • 1.06e4
  • 1.08e4
  • 1.08e4
  • 1.10e4
  • 1.13e4
  • 1.15e4
  • 1.18e4
  • 1.18e4
66.63
  • 66.63
  • 65.13
  • 64.40
  • 63.99
  • 63.95
  • 63.26
  • 62.29
  • 61.48
  • 60.65
  • 60.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.33
  • 66.33
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.03e4
  • 1.03e4
65.51
  • 65.51
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.94
  • 63.94
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.09e4
  • 1.09e4
63.35
  • 63.35
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.19e4
  • 1.19e4
  • 1.24e4
60.23
  • 60.23
  • 58.45
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.19e4
  • 1.19e4
  • 1.20e4
  • 1.43e4
60.14
  • 60.14
  • 59.76
  • 52.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.22e4
  • 1.22e4
59.24
  • 59.24
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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