D. rerio Gene: prim2 - ENSDARG00000052721 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052721
Nameprim2
Descriptionprimase, DNA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050522-471]
OrganismDanio rerio (zebrafish)
Synonym(s)prim2a, wu:fa11h04, zgc:110727
Orthologs(s)23 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.40e3
  • 1.40e3
95.33
  • 95.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.81e3
  • 1.81e3
93.94
  • 93.94
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.14e3
  • 2.14e3
92.82
  • 92.82
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
2.41e3
  • 2.41e3
  • 2.75e3
  • 3.62e3
  • 7.48e3
  • 7.92e3
91.93
  • 91.93
  • 90.79
  • 87.87
  • 74.97
  • 73.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
2.92e3
  • 2.92e3
  • 5.97e3
90.24
  • 90.24
  • 80.03
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.13e3
  • 3.13e3
  • 6.53e3
89.53
  • 89.53
  • 78.13
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.21e3
  • 3.21e3
89.24
  • 89.24
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.44e3
  • 3.44e3
  • 1.50e4
88.49
  • 88.49
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
3.56e3
  • 3.56e3
  • 1.30e4
  • 1.38e4
  • 1.43e4
88.10
  • 88.10
  • 56.38
  • 53.84
  • 51.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.61e3
  • 3.61e3
  • 4.68e3
87.90
  • 87.90
  • 84.34
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
  • 1.31e4
86.29
  • 86.29
  • 56.10
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.82
  • 85.82
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.36e3
  • 4.36e3
  • 1.49e4
85.42
  • 85.42
  • 50.02
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
84.01
  • 84.01
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.48e3
  • 5.48e3
81.67
  • 81.67
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.55
  • 77.55
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.31
  • 77.31
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.92
  • 75.92
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
7.57e3
  • 7.57e3
74.67
  • 74.67
AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
7.76e3
  • 7.76e3
74.03
  • 74.03
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.42e3
  • 8.42e3
71.82
  • 71.82
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.38e3
  • 9.38e3
68.60
  • 68.60
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.17
  • 66.17
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.08
  • 60.08
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.00
  • 60.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.89
  • 55.89
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.01
  • 54.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species16 genesCompare expression
Bilateria23 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000052721.

Cross-references

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