D. rerio Gene: grinab - ENSDARG00000052746 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052746
Namegrinab
Descriptionglutamate receptor, ionotropic, N-methyl D-aspartate-associated protein 1b (glutamate binding) [Source:ZFIN;Acc:ZDB-GENE-040426-1367]
OrganismDanio rerio (zebrafish)
Synonym(s)grina, tmbim3, zgc:64102
Orthologs(s)17 orthologs
Paralog(s)8 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.45
  • 96.45
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.12e3
  • 1.12e3
  • 3.06e3
96.26
  • 96.26
  • 89.75
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.34e3
  • 1.34e3
95.53
  • 95.53
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
94.76
  • 94.76
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.20e3
  • 2.20e3
92.64
  • 92.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.57
  • 92.57
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
2.24e3
  • 2.24e3
  • 2.64e3
  • 3.27e3
  • 3.49e3
  • 3.57e3
  • 4.39e3
  • 5.79e3
  • 6.35e3
  • 6.54e3
  • 6.87e3
92.50
  • 92.50
  • 91.15
  • 89.05
  • 88.30
  • 88.04
  • 85.31
  • 80.63
  • 78.73
  • 78.09
  • 77.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
92.39
  • 92.39
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.54e3
  • 2.54e3
91.49
  • 91.49
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.86
  • 90.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.65
  • 90.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.96e3
  • 2.96e3
90.09
  • 90.09
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.97e3
  • 2.97e3
90.05
  • 90.05
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.01e3
  • 3.01e3
  • 4.80e3
89.93
  • 89.93
  • 83.93
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.01e3
  • 3.01e3
  • 3.22e3
  • 5.02e3
89.91
  • 89.91
  • 89.23
  • 83.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
89.47
  • 89.47
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
3.30e3
  • 3.30e3
  • 3.60e3
  • 1.12e4
88.97
  • 88.97
  • 87.96
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
3.35e3
  • 3.35e3
  • 4.55e3
  • 4.60e3
  • 5.35e3
  • 5.66e3
  • 7.15e3
88.77
  • 88.77
  • 84.76
  • 84.61
  • 82.09
  • 81.04
  • 76.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.57e3
  • 3.57e3
  • 5.05e3
  • 1.49e4
88.06
  • 88.06
  • 83.09
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.68e3
  • 3.68e3
87.68
  • 87.68
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.08e3
  • 4.08e3
86.33
  • 86.33
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000106zygote stage
  • UBERON:00072368 cell stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
4.13e3
  • 4.13e3
  • 4.24e3
  • 4.69e3
  • 5.00e3
  • 5.08e3
  • 5.20e3
  • 5.39e3
  • 5.55e3
  • 5.62e3
  • 5.72e3
  • 6.07e3
  • 6.14e3
  • 6.17e3
  • 6.79e3
  • 8.07e3
  • 1.32e4
  • 1.42e4
  • 1.45e4
86.18
  • 86.18
  • 85.82
  • 84.31
  • 83.26
  • 83.00
  • 82.58
  • 81.94
  • 81.43
  • 81.19
  • 80.83
  • 79.69
  • 79.46
  • 79.33
  • 77.27
  • 72.99
  • 55.87
  • 52.43
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.17
  • 86.17
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.61
  • 85.61
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
4.38e3
  • 4.38e3
  • 4.59e3
  • 6.02e3
  • 6.19e3
85.33
  • 85.33
  • 84.62
  • 79.85
  • 79.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
85.24
  • 85.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.29
  • 83.29
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
5.05e3
  • 5.05e3
  • 6.57e3
  • 8.01e3
  • 8.78e3
  • 9.35e3
83.10
  • 83.10
  • 78.01
  • 73.17
  • 70.61
  • 68.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.29e3
  • 5.29e3
82.29
  • 82.29
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.31e3
  • 5.31e3
82.21
  • 82.21
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.57e3
  • 5.57e3
81.36
  • 81.36
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.48e3
  • 6.48e3
78.31
  • 78.31
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
1.24e4
  • 1.24e4
  • 1.34e4
58.33
  • 58.33
  • 55.16
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000029Pharyngula:Prim-5
1.28e4
  • 1.28e4
57.11
  • 57.11
AEIR
  • AEIR
UBERON:0001016nervous system
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species15 genesCompare expression
Bilateria16 species17 genesCompare expression

Orthology information comes from OMA : ENSDARG00000052746.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000052746.

Cross-references

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