Gene: zgc:153642 - ENSDARG00000052900 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000052900
Name	zgc:153642
Description	zgc:153642 [Source:ZFIN;Acc:ZDB-GENE-061013-527]
Organism	Danio rerio (zebrafish)
Paralog(s)	18 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.42e4 1.42e4	52.40 52.40	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.82e4 1.82e4	39.04 39.04	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.84e4 1.84e4	38.45 38.45	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	2.41e4 2.41e4	19.16 19.16	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	18 genes ENSDARG00000035088 si:ch211-254c8.3 ENSDARG00000056443 zgc:152753 ENSDARG00000059786 CABZ01059408.1 ENSDARG00000063108 CABZ01059392.1 ENSDARG00000074069 zgc:171452 ENSDARG00000076573 si:dkey-88j15.3 ENSDARG00000078832 si:dkey-73p2.3 ENSDARG00000079245 si:dkey-73p2.2 ENSDARG00000079471 si:dkey-88j15.4 ENSDARG00000086365 BX004816.3 ENSDARG00000088561 CR450729.1 ENSDARG00000093029 si:dkey-175d9.2 ENSDARG00000093082 CABZ01059412.1 ENSDARG00000095076 si:dkey-73p2.3 ENSDARG00000095739 si:ch211-131e11.21 ENSDARG00000098993 CABZ01059421.1 ENSDARG00000099508 CABZ01049362.1 ENSDARG00000103058 zgc:172091	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000052900.

Cross-references

Ensembl	ENSDARG00000052900 (zgc:153642)
ZFIN	ZDB-GENE-061013-527 (zgc:153642)
EMBL	CU550714
Uniprot/SPTREMBL	B8JLT8, B8JLT8_DANRE