D. rerio Gene: arf6b - ENSDARG00000052928 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000052928
Namearf6b
DescriptionADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fa98a01, zgc:172028

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e3
  • 1.05e3
96.48
  • 96.48
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.10e3
  • 1.10e3
  • 1.32e3
96.33
  • 96.33
  • 95.58
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.26e3
  • 1.26e3
95.78
  • 95.78
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.32e3
  • 1.32e3
95.57
  • 95.57
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.55e3
  • 1.55e3
  • 1.86e3
  • 1.96e3
  • 1.97e3
  • 2.12e3
  • 2.17e3
  • 2.26e3
  • 2.30e3
  • 3.20e3
  • 3.92e3
94.82
  • 94.82
  • 93.77
  • 93.43
  • 93.42
  • 92.90
  • 92.74
  • 92.44
  • 92.30
  • 89.28
  • 86.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.58e3
  • 1.58e3
  • 1.43e4
94.70
  • 94.70
  • 52.10
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.64e3
  • 1.64e3
94.52
  • 94.52
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.84e3
  • 1.84e3
  • 1.92e3
  • 2.31e3
  • 2.33e3
  • 2.43e3
  • 3.03e3
93.86
  • 93.86
  • 93.57
  • 92.27
  • 92.22
  • 91.85
  • 89.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.94e3
  • 1.94e3
93.51
  • 93.51
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
93.50
  • 93.50
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.98e3
  • 1.98e3
93.38
  • 93.38
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.98e3
  • 1.98e3
  • 2.19e3
  • 2.27e3
  • 7.68e3
93.37
  • 93.37
  • 92.66
  • 92.42
  • 74.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
2.00e3
  • 2.00e3
  • 3.56e3
93.30
  • 93.30
  • 88.07
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.28
  • 93.28
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.03e3
  • 2.03e3
  • 2.15e3
  • 2.22e3
  • 2.24e3
  • 2.46e3
  • 2.78e3
  • 2.88e3
  • 2.93e3
  • 2.95e3
  • 2.95e3
  • 3.13e3
  • 3.15e3
  • 4.58e3
  • 7.51e3
  • 1.38e4
  • 1.42e4
  • 1.44e4
93.21
  • 93.21
  • 92.81
  • 92.57
  • 92.50
  • 91.77
  • 90.70
  • 90.37
  • 90.20
  • 90.13
  • 90.11
  • 89.52
  • 89.44
  • 84.67
  • 74.85
  • 53.84
  • 52.43
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.19e3
  • 2.19e3
92.68
  • 92.68
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.29
  • 92.29
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.60e3
  • 2.60e3
  • 3.92e3
91.28
  • 91.28
  • 86.88
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.62e3
  • 2.62e3
  • 3.29e3
91.24
  • 91.24
  • 88.99
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
91.15
  • 91.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.95
  • 90.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
90.91
  • 90.91
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
2.73e3
  • 2.73e3
  • 2.84e3
  • 3.09e3
90.87
  • 90.87
  • 90.49
  • 89.65
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
2.88e3
  • 2.88e3
  • 3.57e3
  • 4.62e3
  • 4.92e3
  • 5.91e3
90.37
  • 90.37
  • 88.03
  • 84.52
  • 83.53
  • 80.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
88.82
  • 88.82
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.40e3
  • 3.40e3
88.61
  • 88.61
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.79
  • 86.79
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.38e3
  • 4.38e3
85.34
  • 85.34
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
83.29
  • 83.29
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.89e3
  • 6.89e3
76.92
  • 76.92
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.09e3
  • 7.09e3
76.25
  • 76.25
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.58
  • 69.58
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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