D. rerio Gene: slc35f1 - ENSDARG00000053003 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053003
Nameslc35f1
Descriptionsolute carrier family 35, member F1 [Source:ZFIN;Acc:ZDB-GENE-060503-463]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-114g9.2
Orthologs(s)19 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.10e4
  • 1.10e4
  • 1.38e4
63.01
  • 63.01
  • 53.90
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.16e4
  • 1.16e4
  • 1.38e4
  • 1.39e4
  • 1.49e4
  • 1.51e4
61.19
  • 61.19
  • 53.78
  • 53.46
  • 50.25
  • 49.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.17e4
  • 1.17e4
  • 1.31e4
60.86
  • 60.86
  • 56.05
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.09
  • 59.09
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.00
  • 57.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.00
  • 52.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.46e4
  • 1.46e4
  • 1.51e4
51.21
  • 51.21
  • 49.56
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.53e4
  • 1.53e4
48.92
  • 48.92
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.49
  • 48.49
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.54e4
  • 1.54e4
48.41
  • 48.41
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.15
  • 44.15
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.28
  • 41.28
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.83e4
  • 1.83e4
38.75
  • 38.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.13
  • 38.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.66
  • 33.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria19 species19 genesCompare expression

Orthology information comes from OMA : ENSDARG00000053003.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000053003.

Cross-references

EnsemblENSDARG00000053003 (slc35f1)
ZFINZDB-GENE-060503-463 (slc35f1)
EMBLCR926459, CT027574, CU138502
Uniprot/SPTREMBLF1Q4Z9, F1Q4Z9_DANRE

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