Gene: GJE1 (1 to many) - ENSDARG00000053062 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000053062
Name	GJE1 (1 to many)
Description	gap junction protein epsilon 1 [Source:HGNC Symbol;Acc:HGNC:33251]
Organism	Danio rerio (zebrafish)
Synonym(s)	cx23
Orthologs(s)	9 orthologs
Paralog(s)	1 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	1.21e4 1.21e4	59.35 59.35	AEIR AEIR
UBERON:0000307	blastula	[+] 1 stage ZFS:0000011Blastula:1k-cell	1.60e4 1.60e4	46.47 46.47	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	1.70e4 1.70e4	43.00 43.00	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	1.73e4 1.73e4 1.89e4	41.99 41.99 36.81	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.94e4 1.94e4	34.99 34.99	AEIR AEIR
UBERON:0000922	embryo	[+] 3 stages ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage UBERON:0004707pharyngula stage	2.00e4 2.00e4 2.32e4 2.46e4	33.19 33.19 22.38 17.60	AEIR AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	2.19e4 2.19e4	26.74 26.74	AEIR AEIR
UBERON:0002548	larva	[+] 1 stage UBERON:0000069larval stage	2.31e4 2.31e4	22.57 22.57	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	9 species Homo sapiens (human) Mus musculus (mouse) Rattus norvegicus (rat) Equus caballus (horse) Canis lupus familiaris (dog) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Xenopus tropicalis (western clawed frog)	9 genes ENSG00000203733 GJE1 ENSMUSG00000019867 Gje1 ENSRNOG00000012092 Gje1 ENSECAG00000015207 GJE1 ENSCAFG00000030263 GJE1 ENSCPOG00000004729 GJE1 ENSMODG00000017281 GJE1 ENSOANG00000000272 GJE1 ENSXETG00000021112 gje1	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000053062.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	1 gene ENSDARG00000054150 cx23	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000053062.

Cross-references

Ensembl	ENSDARG00000053062 (GJE1 (1 to many))
HGNC	HGNC:33251 (GJE1 (1 to many))
Uniprot/SPTREMBL	E7F439, E7F439_DANRE