D. rerio Gene: cyp8b1 - ENSDARG00000053068 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053068
Namecyp8b1
Descriptioncytochrome P450, family 8, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040808-53]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-198j8.4, zgc:92406

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
985
  • 985
  • 8.40e3
  • 1.12e4
  • 1.21e4
96.70
  • 96.70
  • 71.86
  • 62.48
  • 59.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
89.44
  • 89.44
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
5.01e3
  • 5.01e3
  • 6.05e3
  • 6.37e3
  • 8.14e3
  • 1.03e4
  • 1.47e4
  • 1.50e4
  • 1.78e4
  • 1.78e4
  • 1.81e4
83.23
  • 83.23
  • 79.75
  • 78.67
  • 72.74
  • 65.61
  • 50.90
  • 49.81
  • 40.51
  • 40.35
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
5.19e3
  • 5.19e3
  • 6.16e3
  • 1.04e4
82.63
  • 82.63
  • 79.36
  • 65.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
5.97e3
  • 5.97e3
  • 1.09e4
  • 1.16e4
80.00
  • 80.00
  • 63.63
  • 61.10
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
7.08e3
  • 7.08e3
  • 1.78e4
  • 1.78e4
  • 2.05e4
  • 2.35e4
76.29
  • 76.29
  • 40.40
  • 40.27
  • 31.44
  • 21.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
68.96
  • 68.96
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.86e3
  • 9.86e3
67.00
  • 67.00
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.54
  • 65.54
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.23
  • 59.23
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.75
  • 58.75
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.43e4
  • 1.43e4
  • 2.04e4
52.16
  • 52.16
  • 31.56
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.95
  • 49.95
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.65e4
  • 1.65e4
44.73
  • 44.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.68e4
  • 1.68e4
43.64
  • 43.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000053068 (cyp8b1)
Uniprot/SPTREMBLF1QIJ9, F1QIJ9_DANRE
ZFINZDB-GENE-040808-53 (cyp8b1)

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