D. rerio Gene: b2m - ENSDARG00000053136 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053136
Nameb2m
Descriptionbeta-2-microglobulin [Source:ZFIN;Acc:ZDB-GENE-980526-88]
OrganismDanio rerio (zebrafish)
Synonym(s)bwm, wu:fa94c05, wu:fb10a09
Orthologs(s)20 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
49.0
  • 49.0
99.84
  • 99.84
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
66.0
  • 66.0
99.78
  • 99.78
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
79.0
  • 79.0
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
95.0
  • 95.0
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
95.6
  • 95.6
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
96.6
  • 96.6
99.68
  • 99.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
115
  • 115
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
164
  • 164
  • 1.65e4
99.45
  • 99.45
  • 44.74
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
186
  • 186
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
216
  • 216
99.28
  • 99.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
232
  • 232
  • 1.11e4
99.23
  • 99.23
  • 62.87
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
279
  • 279
99.07
  • 99.07
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
284
  • 284
99.05
  • 99.05
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
307
  • 307
98.97
  • 98.97
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
349
  • 349
98.83
  • 98.83
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
365
  • 365
98.78
  • 98.78
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
468
  • 468
98.44
  • 98.44
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000031Pharyngula:Prim-25
554
  • 554
  • 1.20e4
  • 1.56e4
98.15
  • 98.15
  • 59.68
  • 47.80
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0011150pharyngeal arch derived gill
  • UBERON:0000066fully formed stage
1.87e3
  • 1.87e3
93.75
  • 93.75
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000066fully formed stage
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0004707pharyngula stage
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • UBERON:0000104life cycle
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
2.20e3
  • 2.20e3
  • 1.03e4
  • 1.12e4
  • 1.21e4
  • 1.23e4
  • 1.36e4
  • 1.36e4
  • 1.37e4
  • 1.37e4
  • 1.39e4
  • 1.41e4
  • 1.59e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
  • 1.83e4
92.63
  • 92.63
  • 65.41
  • 62.48
  • 59.41
  • 58.80
  • 54.53
  • 54.53
  • 54.15
  • 54.15
  • 53.31
  • 52.86
  • 46.85
  • 40.58
  • 40.52
  • 40.51
  • 40.39
  • 40.25
  • 39.85
  • 39.38
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
3.31e3
  • 3.31e3
88.92
  • 88.92
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.90e3
  • 4.90e3
  • 9.99e3
  • 1.01e4
  • 1.03e4
  • 1.08e4
  • 1.35e4
83.59
  • 83.59
  • 66.54
  • 66.31
  • 65.42
  • 63.82
  • 54.74
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.51e3
  • 7.51e3
74.85
  • 74.85
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
9.16e3
  • 9.16e3
  • 1.16e4
  • 1.37e4
69.33
  • 69.33
  • 61.27
  • 54.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.04e4
  • 1.04e4
65.21
  • 65.21
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
60.91
  • 60.91
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.32e4
  • 1.32e4
55.77
  • 55.77
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
1.32e4
  • 1.32e4
  • 1.34e4
  • 1.38e4
  • 1.45e4
  • 1.46e4
  • 1.49e4
  • 1.51e4
  • 1.56e4
  • 1.78e4
55.65
  • 55.65
  • 55.19
  • 53.88
  • 51.58
  • 51.25
  • 50.08
  • 49.37
  • 47.85
  • 40.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.35e4
  • 1.35e4
  • 1.57e4
  • 1.71e4
54.81
  • 54.81
  • 47.55
  • 42.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.44e4
  • 1.44e4
51.90
  • 51.90
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000053136.

Cross-references

EnsemblENSDARG00000053136 (b2m)
ZFINZDB-GENE-980526-88 (b2m)
EMBLBC062841, BC162420, BC162435, CR558305, L05383, L05384
Uniprot/SPTREMBLB0UYS1, B0UYS1_DANRE, H0WF44, H0WF44_DANRE
Uniprot/SWISSPROTB2MG_DANRE, Q04475

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