D. rerio Gene: zgc:113372 - ENSDARG00000053263 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053263
Namezgc:113372
Descriptionzgc:113372 [Source:ZFIN;Acc:ZDB-GENE-050913-150]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
2.01e3
  • 2.01e3
  • 2.58e3
93.26
  • 93.26
  • 91.35
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
2.55e3
  • 2.55e3
  • 4.98e3
  • 6.54e3
  • 6.64e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.97e3
  • 6.97e3
  • 7.03e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 8.96e3
  • 8.96e3
  • 1.15e4
  • 1.46e4
  • 1.50e4
91.46
  • 91.46
  • 83.33
  • 78.12
  • 77.77
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.66
  • 76.66
  • 76.46
  • 76.46
  • 74.99
  • 74.99
  • 74.99
  • 74.99
  • 73.52
  • 69.99
  • 69.99
  • 61.34
  • 51.01
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.26e3
  • 3.26e3
89.07
  • 89.07
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.93e3
  • 3.93e3
  • 6.55e3
86.83
  • 86.83
  • 78.08
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.98e3
  • 3.98e3
  • 1.47e4
86.68
  • 86.68
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.97e3
  • 4.97e3
83.35
  • 83.35
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.00e3
  • 5.00e3
83.28
  • 83.28
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.75e3
  • 5.75e3
80.75
  • 80.75
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.11
  • 79.11
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.28e3
  • 7.28e3
75.64
  • 75.64
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
7.88e3
  • 7.88e3
  • 8.35e3
  • 1.04e4
  • 1.09e4
  • 1.12e4
73.61
  • 73.61
  • 72.06
  • 65.03
  • 63.60
  • 62.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
7.90e3
  • 7.90e3
  • 1.15e4
73.56
  • 73.56
  • 61.59
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.97e3
  • 7.97e3
73.32
  • 73.32
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.35e3
  • 8.35e3
72.03
  • 72.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.06e3
  • 9.06e3
69.67
  • 69.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.14e3
  • 9.14e3
  • 1.50e4
69.40
  • 69.40
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
  • 1.73e4
68.93
  • 68.93
  • 42.22
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.71e3
  • 9.71e3
67.49
  • 67.49
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.52
  • 65.52
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
  • 1.17e4
62.95
  • 62.95
  • 60.82
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.88
  • 60.88
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.66
  • 58.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.11
  • 53.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.15
  • 52.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000053263 (zgc:113372)
ZFINZDB-GENE-050913-150 (zgc:113372)
EMBLCU928123
Uniprot/SPTREMBLF1Q8D3, F1Q8D3_DANRE, F1QRU4, F1QRU4_DANRE

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