D. rerio Gene: RAP1GAP (1 to many) - ENSDARG00000053272 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053272
NameRAP1GAP (1 to many)
Descriptionsi:dkey-166d12.2 [Source:ZFIN;Acc:ZDB-GENE-131119-39]
OrganismDanio rerio (zebrafish)
Synonym(s)kiaa0474, rap1ga1, rap1gap, rap1gap1, rap1gapii

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.41
  • 77.41
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
73.44
  • 73.44
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
70.51
  • 70.51
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.09e3
  • 9.09e3
  • 1.57e4
69.55
  • 69.55
  • 47.53
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.61
  • 67.61
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.85
  • 65.85
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.98
  • 64.98
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.04
  • 60.04
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.27e4
  • 1.27e4
  • 1.48e4
57.59
  • 57.59
  • 50.44
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.37e4
  • 1.37e4
  • 1.67e4
54.17
  • 54.17
  • 44.17
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.38e4
  • 1.38e4
53.85
  • 53.85
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.47e4
  • 1.47e4
  • 1.80e4
50.64
  • 50.64
  • 39.79
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.55
  • 50.55
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.48
  • 50.48
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.52e4
  • 1.52e4
  • 1.56e4
  • 1.68e4
  • 1.71e4
  • 1.72e4
49.21
  • 49.21
  • 47.74
  • 43.67
  • 42.68
  • 42.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.00
  • 49.00
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.76
  • 44.76
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.66e4
  • 1.66e4
  • 1.85e4
44.56
  • 44.56
  • 37.97
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.39
  • 44.39
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.65
  • 34.65
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.32
  • 33.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU694362
EnsemblENSDARG00000053272 (RAP1GAP (1 to many))
HGNCHGNC:9858 (RAP1GAP (1 to many))
Uniprot/SPTREMBLF1Q8E0, F1Q8E0_DANRE, X1WFK7, X1WFK7_DANRE
ZFINZDB-GENE-131119-39 (si:dkey-166d12.2)

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