D. rerio Gene: cilp - ENSDARG00000053362 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053362
Namecilp
Descriptioncartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7137994

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.81e3
  • 3.81e3
87.11913
  • 87.11913
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
4.51e3
  • 4.51e3
  • 4.97e3
  • 5.76e3
  • 6.08e3
  • 7.06e3
84.76457
  • 84.76457
  • 83.21532
  • 80.54856
  • 79.45698
  • 76.13939
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.48e3
  • 6.48e3
78.11502
  • 78.11502
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
77.84125
  • 77.84125
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.68e3
  • 7.68e3
  • 1.67e4
74.03546
  • 74.03546
  • 43.48273
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
70.68585
  • 70.68585
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
8.86e3
  • 8.86e3
70.05959
  • 70.05959
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
1.04e4
  • 1.04e4
  • 1.07e4
  • 1.07e4
  • 1.11e4
  • 1.15e4
  • 1.15e4
  • 1.17e4
64.97970
  • 64.97970
  • 63.87031
  • 63.87031
  • 62.47802
  • 61.09084
  • 61.09084
  • 60.50435
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005886post-hyoid pharyngeal arch skeleton
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.11e4
  • 1.11e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
  • 1.13e4
  • 1.25e4
  • 1.25e4
62.47802
  • 62.47802
  • 62.47802
  • 61.88109
  • 61.74610
  • 61.74610
  • 57.87109
  • 57.87109
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000026Segmentation:14-19 somites
1.28e4
  • 1.28e4
56.85769
  • 56.85769
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.41548
  • 55.41548
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.62e4
  • 1.62e4
45.39070
  • 45.39070
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.14451
  • 40.14451
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCR293520
EnsemblENSDARG00000053362 (cilp)
Uniprot/SPTREMBLF1Q775, F1Q775_DANRE
ZFINZDB-GENE-050208-76 (cilp)

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