D. rerio Gene: rpl31 - ENSDARG00000053365 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053365
Namerpl31
Descriptionribosomal protein L31 [Source:ZFIN;Acc:ZDB-GENE-060331-121]
OrganismDanio rerio (zebrafish)
Synonym(s)fe38a04, wu:fe38a04, zgc:136896
Orthologs(s)35 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
29.4
  • 29.4
99.91
  • 99.91
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
51.0
  • 51.0
  • 117
  • 134
  • 144
  • 170
  • 190
  • 205
  • 213
  • 256
  • 370
99.83
  • 99.83
  • 99.61
  • 99.55
  • 99.52
  • 99.43
  • 99.37
  • 99.32
  • 99.29
  • 99.15
  • 98.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
83.0
  • 83.0
  • 126
99.73
  • 99.73
  • 99.58
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
114
  • 114
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
121
  • 121
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
124
  • 124
99.59
  • 99.59
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
126
  • 126
99.58
  • 99.58
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
130
  • 130
99.57
  • 99.57
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
139
  • 139
  • 1.05e3
99.54
  • 99.54
  • 96.48
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
143
  • 143
99.52
  • 99.52
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
152
  • 152
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
155
  • 155
  • 681
99.48
  • 99.48
  • 97.72
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
158
  • 158
99.47
  • 99.47
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
166
  • 166
  • 246
  • 254
99.45
  • 99.45
  • 99.18
  • 99.15
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
168
  • 168
  • 348
99.44
  • 99.44
  • 98.84
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
181
  • 181
99.40
  • 99.40
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
186
  • 186
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
186
  • 186
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
190
  • 190
99.37
  • 99.37
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
190
  • 190
  • 254
  • 265
  • 386
  • 394
  • 468
99.37
  • 99.37
  • 99.15
  • 99.12
  • 98.71
  • 98.68
  • 98.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
209
  • 209
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
233
  • 233
  • 245
  • 267
  • 284
  • 297
  • 312
  • 321
  • 350
  • 359
  • 438
  • 545
  • 572
  • 838
  • 2.95e3
99.22
  • 99.22
  • 99.18
  • 99.11
  • 99.05
  • 99.01
  • 98.96
  • 98.93
  • 98.83
  • 98.80
  • 98.54
  • 98.18
  • 98.09
  • 97.20
  • 90.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
234
  • 234
99.22
  • 99.22
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
267
  • 267
99.11
  • 99.11
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
311
  • 311
  • 343
  • 1.37e3
  • 1.66e3
98.96
  • 98.96
  • 98.86
  • 95.42
  • 94.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
320
  • 320
98.93
  • 98.93
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
494
  • 494
98.35
  • 98.35
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
649
  • 649
97.83
  • 97.83
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
756
  • 756
  • 771
  • 1.37e3
  • 1.71e3
  • 2.69e3
97.47
  • 97.47
  • 97.42
  • 95.40
  • 94.27
  • 90.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.07e3
  • 1.07e3
96.43
  • 96.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.16e3
  • 3.16e3
89.41
  • 89.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.67e3
  • 3.67e3
87.70
  • 87.70
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.39e3
  • 4.39e3
85.32
  • 85.32
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species28 genesCompare expression
Bilateria23 species35 genesCompare expression

Orthology information comes from OMA : ENSDARG00000053365.

Cross-references

EnsemblENSDARG00000053365 (rpl31)
ZFINZDB-GENE-060331-121 (rpl31)
EMBLBC114301, CU914623
Uniprot/SPTREMBLQ24JV3, Q24JV3_DANRE

Do not show this banner again