D. rerio Gene: eif3jb - ENSDARG00000053370 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053370
Nameeif3jb
Descriptioneukaryotic translation initiation factor 3, subunit Jb [Source:ZFIN;Acc:ZDB-GENE-040426-2900]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fi35e11, zgc:55443

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
1.65e3
  • 1.65e3
  • 2.20e3
  • 2.30e3
  • 3.72e3
  • 4.16e3
  • 6.34e3
  • 6.84e3
  • 9.05e3
  • 9.32e3
  • 1.00e4
94.46
  • 94.46
  • 92.64
  • 92.31
  • 87.56
  • 86.09
  • 78.76
  • 77.10
  • 69.70
  • 68.80
  • 66.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.46
  • 94.46
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.88e3
  • 1.88e3
93.70
  • 93.70
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.95e3
  • 1.95e3
93.46
  • 93.46
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
2.22e3
  • 2.22e3
  • 5.91e3
  • 7.10e3
  • 7.36e3
  • 7.39e3
  • 9.38e3
92.58
  • 92.58
  • 80.21
  • 76.24
  • 75.36
  • 75.26
  • 68.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.36e3
  • 2.36e3
92.11
  • 92.11
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
2.45e3
  • 2.45e3
  • 3.65e3
  • 8.47e3
  • 1.08e4
  • 1.09e4
91.78
  • 91.78
  • 87.79
  • 71.66
  • 63.81
  • 63.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.62e3
  • 2.62e3
91.23
  • 91.23
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.65e3
  • 2.65e3
91.14
  • 91.14
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.65e3
  • 2.65e3
  • 3.73e3
91.13
  • 91.13
  • 87.52
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.71e3
  • 2.71e3
  • 3.84e3
90.94
  • 90.94
  • 87.14
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.79e3
  • 2.79e3
90.66
  • 90.66
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.15e3
  • 3.15e3
89.46
  • 89.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
88.31
  • 88.31
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.27
  • 88.27
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.75e3
  • 3.75e3
  • 8.11e3
  • 1.05e4
  • 1.05e4
87.43
  • 87.43
  • 72.84
  • 65.00
  • 64.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
3.90e3
  • 3.90e3
  • 1.12e4
  • 1.21e4
86.95
  • 86.95
  • 62.48
  • 59.50
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.38e3
  • 4.38e3
85.33
  • 85.33
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.61e3
  • 4.61e3
84.56
  • 84.56
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.40
  • 84.40
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.91e3
  • 4.91e3
83.57
  • 83.57
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.95e3
  • 4.95e3
83.43
  • 83.43
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000106zygote stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
5.16e3
  • 5.16e3
  • 6.55e3
  • 6.75e3
  • 6.85e3
  • 6.87e3
  • 7.57e3
  • 7.69e3
  • 7.81e3
  • 8.11e3
  • 8.48e3
  • 8.48e3
  • 8.54e3
  • 8.60e3
  • 8.95e3
  • 1.47e4
  • 1.50e4
82.74
  • 82.74
  • 78.06
  • 77.39
  • 77.08
  • 76.99
  • 74.66
  • 74.27
  • 73.85
  • 72.85
  • 71.60
  • 71.60
  • 71.40
  • 71.21
  • 70.03
  • 50.68
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
5.41e3
  • 5.41e3
  • 7.71e3
81.87
  • 81.87
  • 74.19
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.63e3
  • 5.63e3
81.15
  • 81.15
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
  • 6.48e3
79.54
  • 79.54
  • 78.30
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.25e3
  • 6.25e3
  • 6.28e3
  • 9.81e3
79.08
  • 79.08
  • 78.98
  • 67.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.27e3
  • 6.27e3
78.99
  • 78.99
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
7.48e3
  • 7.48e3
  • 1.29e4
74.97
  • 74.97
  • 56.86
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.11e3
  • 8.11e3
72.84
  • 72.84
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.25e3
  • 8.25e3
72.37
  • 72.37
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.23e3
  • 9.23e3
69.10
  • 69.10
AEIR
  • AEIR
UBERON:0000965lens of camera-type eye
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
  • 1.10e4
  • 1.34e4
  • 1.34e4
64.27
  • 64.27
  • 63.32
  • 55.24
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.14e4
  • 1.14e4
  • 1.25e4
  • 1.31e4
  • 1.34e4
61.88
  • 61.88
  • 58.31
  • 56.23
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.16e4
  • 1.16e4
  • 1.34e4
  • 1.35e4
  • 1.41e4
61.09
  • 61.09
  • 55.24
  • 54.73
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000058polster
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.20e4
61.09
  • 61.09
  • 61.09
  • 59.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.18e4
  • 1.18e4
  • 1.23e4
  • 1.41e4
  • 1.41e4
60.50
  • 60.50
  • 58.80
  • 52.75
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.18e4
  • 1.18e4
  • 1.18e4
60.50
  • 60.50
  • 60.50
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
1.25e4
  • 1.25e4
58.31
  • 58.31
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.32e4
  • 1.32e4
55.82
  • 55.82
AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.34e4
  • 1.34e4
  • 1.41e4
  • 1.41e4
54.97
  • 54.97
  • 52.75
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR293520
EnsemblENSDARG00000053370 (eif3jb)
Uniprot/SPTREMBLF1Q774, F1Q774_DANRE
ZFINZDB-GENE-040426-2900 (eif3jb)

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