D. rerio Gene: nptxrb - ENSDARG00000053375 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053375
Namenptxrb
Descriptionneuronal pentraxin receptor b [Source:ZFIN;Acc:ZDB-GENE-050208-595]
OrganismDanio rerio (zebrafish)
Synonym(s)nptxr, si:dkeyp-20e4.1, zgc:158178

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.83e3
  • 4.83e3
83.82
  • 83.82
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
  • 1.19e4
79.76
  • 79.76
  • 60.32
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.49e3
  • 7.49e3
  • 9.95e3
74.93
  • 74.93
  • 66.68
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
7.81e3
  • 7.81e3
  • 8.42e3
  • 1.22e4
  • 1.26e4
  • 1.38e4
73.85
  • 73.85
  • 71.81
  • 59.13
  • 57.92
  • 53.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.34e3
  • 9.34e3
68.73
  • 68.73
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.76
  • 64.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.18
  • 61.18
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.36e4
  • 1.36e4
54.41
  • 54.41
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.67
  • 41.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.41e4
  • 2.41e4
19.38
  • 19.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000053375 (nptxrb)
ZFINZDB-GENE-050208-595 (nptxrb)
EMBLBX294165
Uniprot/SPTREMBLQ1LXR8, Q1LXR8_DANRE

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