D. rerio Gene: fam189a1 - ENSDARG00000053380 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053380
Namefam189a1
Descriptionfamily with sequence similarity 189, member A1 [Source:ZFIN;Acc:ZDB-GENE-040718-129]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92649

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.68e3
  • 8.68e3
  • 2.08e4
70.94
  • 70.94
  • 30.46
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
69.46
  • 69.46
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.56e3
  • 9.56e3
67.99
  • 67.99
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
1.00e4
  • 1.00e4
  • 1.13e4
  • 1.17e4
  • 1.24e4
  • 1.28e4
66.35
  • 66.35
  • 62.22
  • 60.86
  • 58.45
  • 57.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
  • 1.40e4
62.44
  • 62.44
  • 53.04
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.14e4
  • 1.14e4
61.92
  • 61.92
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.27e4
  • 1.30e4
  • 1.65e4
60.49
  • 60.49
  • 57.52
  • 56.39
  • 44.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.22e4
  • 1.22e4
  • 1.22e4
  • 1.25e4
  • 1.40e4
  • 1.47e4
  • 1.54e4
  • 1.71e4
  • 1.75e4
59.19
  • 59.19
  • 59.14
  • 58.10
  • 53.03
  • 50.63
  • 48.29
  • 42.62
  • 41.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.24e4
  • 1.24e4
58.46
  • 58.46
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
  • 1.32e4
  • 1.42e4
55.81
  • 55.81
  • 55.79
  • 52.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.33e4
  • 1.33e4
55.50
  • 55.50
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.39e4
  • 1.39e4
  • 1.59e4
  • 1.62e4
  • 1.77e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
53.37
  • 53.37
  • 46.71
  • 45.72
  • 40.62
  • 40.38
  • 40.18
  • 39.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.20
  • 53.20
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.40e4
  • 1.40e4
  • 1.41e4
53.16
  • 53.16
  • 52.65
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.29
  • 50.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.43
  • 48.43
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.94
  • 47.94
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
  • 1.80e4
46.16
  • 46.16
  • 39.89
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.16
  • 41.16
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
27.03
  • 27.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.19
  • 25.19
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.64
  • 23.64
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000053380 (fam189a1)
ZFINZDB-GENE-040718-129 (fam189a1)
EMBLBX649429, CR293520, CR356242
Uniprot/SPTREMBLF1Q773, F1Q773_DANRE

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