Gene: myl2b - ENSDARG00000053424 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000053424
Name	myl2b
Description	myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
Organism	Danio rerio (zebrafish)
Synonym(s)	myl2, myl2 {eco:0000313\|embl:aai14290.1,gn eco:0000313\|zfin:zdb-gene-060331-137}, zgc:136848
Orthologs(s)	17 orthologs
Paralog(s)	49 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	5.56e3 5.56e3 1.66e4	81.37 81.37 44.36	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	7.91e3 7.91e3	73.50 73.50	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.03e4 1.03e4	65.53 65.53	AEIR AEIR
UBERON:0002081	cardiac atrium	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.31e4 1.31e4	56.24 56.24	AEIR AEIR
UBERON:0002329	somite	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.31e4 1.31e4	56.24 56.24	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.33e4 1.33e4 2.57e4	55.45 55.45 14.07	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.42e4 1.42e4	52.47 52.47	AEIR AEIR
UBERON:0002082	cardiac ventricle	[+] 1 stage ZFS:0000033Hatching:Long-pec	1.49e4 1.49e4	49.99 49.99	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.65e4 1.65e4	44.75 44.75	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.69e4 1.69e4	43.44 43.44	AEIR AEIR
UBERON:0000922	embryo	[+] 2 stages ZFS:0000037Larval:Day 5 ZFS:0000033Hatching:Long-pec	1.74e4 1.74e4 2.18e4	41.82 41.82 27.00	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.19e4 2.19e4	26.71 26.71	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	2.25e4 2.25e4	24.71 24.71	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000111245 MYL2 ENSMUSG00000013936 Myl2 ENSGGOG00000004869 MYL2 ENSMMUG00000002347 MYL2 ENSRNOG00000030848 Myl2 ENSBTAG00000018369 MYL2 ENSECAG00000007867 MYL2 ENSOCUG00000025586 MYL2 ENSCAFG00000008524 MYL2 ENSFCAG00000011170 MYL2 ENSCPOG00000010717 MYL2 ENSEEUG00000008225 MYL2 ENSMODG00000011495 MYL2 ENSOANG00000004792 MYL2 ENSGALG00000004582 MYL2 ENSACAG00000002200 MYL2 ENSXETG00000011683 myl2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000053424.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	1 gene ENSDARG00000104722 MYL2 (1 to many)	Compare expression	[+]
Eukaryota	49 genes ENSDARG00000008030 myl9b ENSDARG00000008494 myl6 ENSDARG00000009637 rcvrn3 ENSDARG00000010454 guca1a ENSDARG00000011334 ncaldb ENSDARG00000011400 tnnc1a ENSDARG00000011519 myl4 ENSDARG00000011825 cetn3 ENSDARG00000014196 myl1 ENSDARG00000015050 calm3a ENSDARG00000017441 mylz3 ENSDARG00000018397 hpca ENSDARG00000019096 myl7 ENSDARG00000019902 rcvrn2 ENSDARG00000021811 calm1a ENSDARG00000022763 hpcal1 ENSDARG00000023228 vsnl1a ENSDARG00000025326 myl12.2 ENSDARG00000025788 chp2 ENSDARG00000030758 guca1c ENSDARG00000031427 calm2a ENSDARG00000032976 cmlc1 ENSDARG00000033738 zgc:153867 ENSDARG00000034187 calm1b ENSDARG00000037539 tnnc1b ENSDARG00000038123 myl9a ENSDARG00000041215 cetn4 ENSDARG00000042245 myl13 ENSDARG00000044053 vsnl1b ENSDARG00000044629 guca1d ENSDARG00000052223 rcvrna ENSDARG00000052859 chp1 ENSDARG00000054186 ncs1b ENSDARG00000055229 ncs1a ENSDARG00000059257 RCVRN (1 to many) ENSDARG00000062592 myl10 ENSDARG00000069360 ppp3r1b ENSDARG00000070491 hpcal4 ENSDARG00000070688 ncalda ENSDARG00000070835 tnnc2 ENSDARG00000074057 calm3b ENSDARG00000074323 efcab2 ENSDARG00000092659 ppp3r1a ENSDARG00000095002 TNNC2 (1 to many) ENSDARG00000099712 MYL3 ENSDARG00000099766 myl12.1 ENSDARG00000100825 calm3a ENSDARG00000101510 cetn2 ENSDARG00000104722 MYL2 (1 to many)	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000053424.

Cross-references

Ensembl	ENSDARG00000053424 (myl2b)
ZFIN	ZDB-GENE-060331-137 (myl2b)
EMBL	BC114289, BX004972
Uniprot/SPTREMBL	F1QGA5, F1QGA5_DANRE, Q24JV6, Q24JV6_DANRE