D. rerio Gene: serinc2l - ENSDARG00000053425 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053425
Nameserinc2l
Descriptionserine incorporator 2, like [Source:ZFIN;Acc:ZDB-GENE-100921-58]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-255i3.3
Orthologs(s)18 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.17e3
  • 4.17e3
86.03
  • 86.03
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.65
  • 84.65
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.19e3
  • 5.19e3
82.62
  • 82.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.49
  • 80.49
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
7.31e3
  • 7.31e3
  • 9.96e3
75.53
  • 75.53
  • 66.64
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.64e3
  • 7.64e3
74.43
  • 74.43
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.72e3
  • 7.72e3
74.14
  • 74.14
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.84e3
  • 8.84e3
70.41
  • 70.41
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.42
  • 69.42
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.66
  • 65.66
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.87
  • 64.87
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.06e4
  • 1.06e4
  • 1.64e4
64.51
  • 64.51
  • 45.20
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.84
  • 63.84
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.09e4
  • 1.09e4
  • 1.23e4
63.59
  • 63.59
  • 58.96
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.55
  • 63.55
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.09e4
  • 1.09e4
  • 1.12e4
63.34
  • 63.34
  • 62.46
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.01
  • 63.01
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.12
  • 62.12
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.96
  • 61.96
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.92
  • 56.92
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
1.30e4
  • 1.30e4
  • 1.31e4
  • 1.34e4
  • 1.42e4
  • 1.56e4
56.48
  • 56.48
  • 56.01
  • 55.00
  • 52.50
  • 47.83
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.32e4
  • 1.32e4
  • 1.46e4
55.66
  • 55.66
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.65
  • 55.65
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.59
  • 55.59
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.84
  • 50.84
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.52e4
  • 1.52e4
49.22
  • 49.22
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression
Eumetazoa3 genesCompare expression
Opisthokonta4 genesCompare expression
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000053425.

Cross-references

EnsemblENSDARG00000053425 (serinc2l)
ZFINZDB-GENE-100921-58 (serinc2l)
EMBLCR626886
Uniprot/SPTREMBLE9QIY8, E9QIY8_DANRE

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