D. rerio Gene: pop5 - ENSDARG00000053452 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053452
Namepop5
DescriptionPOP5 homolog, ribonuclease P/MRP subunit [Source:ZFIN;Acc:ZDB-GENE-050320-123]
OrganismDanio rerio (zebrafish)
Synonym(s)fc69d03, wu:fc69d03, wu:fy24c05, zgc:110616

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.78
  • 93.78
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.90e3
  • 2.90e3
90.29
  • 90.29
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
3.61e3
  • 3.61e3
  • 5.44e3
  • 6.53e3
  • 6.70e3
  • 7.03e3
  • 7.17e3
87.91
  • 87.91
  • 81.80
  • 78.12
  • 77.58
  • 76.46
  • 76.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
4.45e3
  • 4.45e3
  • 5.50e3
  • 5.52e3
  • 5.98e3
  • 6.70e3
  • 7.01e3
  • 7.09e3
  • 7.45e3
  • 1.12e4
  • 1.26e4
85.11
  • 85.11
  • 81.59
  • 81.53
  • 79.98
  • 77.56
  • 76.52
  • 76.26
  • 75.07
  • 62.67
  • 57.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.45e3
  • 4.45e3
85.11
  • 85.11
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.09e3
  • 5.09e3
82.97
  • 82.97
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
5.31e3
  • 5.31e3
  • 5.44e3
  • 6.32e3
  • 6.37e3
  • 6.46e3
82.24
  • 82.24
  • 81.77
  • 78.84
  • 78.66
  • 78.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.33e3
  • 5.33e3
82.16
  • 82.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.40e3
  • 5.40e3
81.93
  • 81.93
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.51
  • 81.51
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
6.12e3
  • 6.12e3
  • 6.43e3
  • 7.20e3
  • 7.38e3
  • 7.45e3
  • 7.46e3
  • 7.64e3
  • 8.43e3
  • 9.53e3
  • 1.04e4
  • 1.08e4
  • 1.09e4
  • 1.23e4
  • 1.25e4
  • 1.49e4
  • 1.50e4
79.52
  • 79.52
  • 78.48
  • 75.90
  • 75.28
  • 75.04
  • 75.03
  • 74.41
  • 71.79
  • 68.10
  • 65.05
  • 63.69
  • 63.44
  • 58.78
  • 58.27
  • 50.25
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.70e3
  • 6.70e3
77.58
  • 77.58
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.72e3
  • 6.72e3
77.51
  • 77.51
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.76e3
  • 6.76e3
77.36
  • 77.36
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.95e3
  • 6.95e3
76.74
  • 76.74
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
  • 9.77e3
76.61
  • 76.61
  • 67.29
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.07e3
  • 7.07e3
  • 1.87e4
76.32
  • 76.32
  • 37.30
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.08e3
  • 7.08e3
76.31
  • 76.31
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.57e3
  • 7.57e3
74.65
  • 74.65
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
7.94e3
  • 7.94e3
  • 8.97e3
  • 1.20e4
73.43
  • 73.43
  • 69.95
  • 59.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.01e3
  • 8.01e3
  • 9.09e3
73.18
  • 73.18
  • 69.57
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
72.99
  • 72.99
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
8.09e3
  • 8.09e3
72.92
  • 72.92
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.25e3
  • 8.25e3
72.39
  • 72.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
72.32
  • 72.32
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
  • 9.95e3
71.43
  • 71.43
  • 66.69
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.69e3
  • 8.69e3
70.90
  • 70.90
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
70.12
  • 70.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.93e3
  • 8.93e3
70.09
  • 70.09
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.12e3
  • 9.12e3
  • 1.03e4
  • 1.36e4
69.48
  • 69.48
  • 65.56
  • 54.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.15e3
  • 9.15e3
69.35
  • 69.35
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.66
  • 56.66
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC091467
EnsemblENSDARG00000053452 (pop5)
Uniprot/SWISSPROTPOP5_DANRE, Q5BJI6
ZFINZDB-GENE-050320-123 (pop5)

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