D. rerio Gene: ccdc103 - ENSDARG00000053455 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053455
Nameccdc103
Descriptioncoiled-coil domain containing 103 [Source:ZFIN;Acc:ZDB-GENE-040718-253]
OrganismDanio rerio (zebrafish)
Synonym(s)smh, zgc:100838

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
505
  • 505
98.31
  • 98.31
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.66
  • 71.66
AEIR
  • AEIR
UBERON:0001707nasal cavity
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:2007042spinal cord neural tube
  • ZFS:0000027Segmentation:20-25 somites
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.12e4
  • 1.12e4
  • 1.22e4
  • 1.46e4
62.34
  • 62.34
  • 59.29
  • 51.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.19e4
  • 1.19e4
  • 1.20e4
  • 1.82e4
60.18
  • 60.18
  • 59.95
  • 38.94
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000023forerunner cell group (Danio)
  • ZFS:0000020Gastrula:75%-epiboly
1.21e4
  • 1.21e4
59.36
  • 59.36
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.24e4
  • 1.24e4
58.60
  • 58.60
AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000024Segmentation:5-9 somites
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.28e4
  • 1.28e4
57.23
  • 57.23
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.42e4
  • 1.42e4
52.33
  • 52.33
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.44e4
  • 1.44e4
  • 1.49e4
  • 1.54e4
  • 1.61e4
  • 1.63e4
  • 1.97e4
  • 1.99e4
51.88
  • 51.88
  • 50.03
  • 48.33
  • 46.23
  • 45.33
  • 34.08
  • 33.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.46e4
  • 1.46e4
  • 1.47e4
  • 1.54e4
  • 1.77e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
51.05
  • 51.05
  • 50.85
  • 48.39
  • 40.62
  • 40.56
  • 40.18
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000027Segmentation:20-25 somites
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000024Segmentation:5-9 somites
1.49e4
  • 1.49e4
49.98
  • 49.98
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.38
  • 49.38
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.56e4
  • 1.56e4
47.86
  • 47.86
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.51
  • 46.51
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.93
  • 43.93
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
  • 1.90e4
41.35
  • 41.35
  • 36.24
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.75e4
  • 1.75e4
41.24
  • 41.24
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
1.77e4
  • 1.77e4
  • 1.79e4
  • 1.88e4
40.69
  • 40.69
  • 39.93
  • 36.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
  • 2.35e4
40.30
  • 40.30
  • 21.47
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.60
  • 39.60
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.62
  • 37.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.85
  • 33.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC076434
EnsemblENSDARG00000053455 (ccdc103)
Uniprot/SWISSPROTCC103_DANRE, Q6DGB6
ZFINZDB-GENE-040718-253 (ccdc103)

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