D. rerio Gene: nog3 - ENSDARG00000053528 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053528
Namenog3
Descriptionnoggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
OrganismDanio rerio (zebrafish)
Synonym(s)noggin, znog3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.78e3
  • 4.78e3
84.00
  • 84.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.00
  • 82.00
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
6.89e3
  • 6.89e3
  • 7.47e3
76.92
  • 76.92
  • 74.99
AEIR
  • AEIR
  • AEIR
UBERON:2000364hypural
  • ZFS:0000040Larval:Days 14-20
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2001419dorsal fin pterygiophore
  • ZFS:0000041Larval:Days 21-29
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000040Larval:Days 14-20
7.47e3
  • 7.47e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000176anal fin lepidotrichium
  • ZFS:0000041Larval:Days 21-29
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0007390pectoral appendage cartilage tissue
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 7.47e3
75.00
  • 75.00
  • 75.00
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
7.94e3
  • 7.94e3
73.43
  • 73.43
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
8.01e3
  • 8.01e3
  • 1.03e4
  • 1.18e4
73.20
  • 73.20
  • 65.50
  • 60.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.83e3
  • 8.83e3
70.44
  • 70.44
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
  • 1.59e4
70.00
  • 70.00
  • 46.64
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.07e4
  • 1.07e4
  • 1.26e4
  • 1.54e4
  • 1.55e4
  • 1.59e4
64.20
  • 64.20
  • 57.93
  • 48.51
  • 48.04
  • 46.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
  • 1.49e4
56.08
  • 56.08
  • 50.09
AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.38
  • 51.38
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
  • 1.56e4
50.54
  • 50.54
  • 47.80
AEIR
  • AEIR
  • AEIR
CL:0000138chondrocyte
  • ZFS:0000039Larval:Days 7-13
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2000438parhypural
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2001420anal fin pterygiophore
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000040Larval:Days 14-20
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:2001560hypural 1
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007215trabecula cranii
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0011242ethmoid cartilage
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.19
  • 45.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.97
  • 44.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.94
  • 43.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
41.96
  • 41.96
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.53
  • 36.53
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.02
  • 34.02
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCT573006
EnsemblENSDARG00000053528 (nog3)
Uniprot/SPTREMBLE7FFB8, E7FFB8_DANRE
ZFINZDB-GENE-990714-8 (nog3)

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