D. rerio Gene: tspan3b - ENSDARG00000053559 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053559
Nametspan3b
Descriptiontetraspanin 3b [Source:ZFIN;Acc:ZDB-GENE-070424-42]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:162904

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.78e3
  • 1.78e3
94.06
  • 94.06
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.37e3
  • 2.37e3
92.08
  • 92.08
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
4.84e3
  • 4.84e3
  • 1.19e4
  • 1.46e4
  • 1.53e4
  • 1.65e4
83.80
  • 83.80
  • 60.06
  • 51.21
  • 48.73
  • 44.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.00e3
  • 5.00e3
  • 1.20e4
83.27
  • 83.27
  • 59.81
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.75e3
  • 9.75e3
67.36
  • 67.36
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.23
  • 53.23
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.87
  • 51.87
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.47e4
  • 1.47e4
50.92
  • 50.92
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.93
  • 40.93
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.92
  • 34.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.48
  • 24.48
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.36e4
  • 2.36e4
21.03
  • 21.03
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.56e4
  • 2.56e4
14.23
  • 14.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX001033
EnsemblENSDARG00000053559 (tspan3b)
Uniprot/SPTREMBLF1QPR8, F1QPR8_DANRE
ZFINZDB-GENE-070424-42 (tspan3b)

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