D. rerio Gene: ms4a17a.11 - ENSDARG00000053561 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053561
Namems4a17a.11
Descriptionmembrane-spanning 4-domains, subfamily A, member 17A.11 [Source:ZFIN;Acc:ZDB-GENE-050417-157]
OrganismDanio rerio (zebrafish)
Synonym(s)ms4a4a, wu:fj02f05, zgc:112035

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
872
  • 872
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.47e3
  • 1.47e3
95.08
  • 95.08
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.60
  • 92.60
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
2.46e3
  • 2.46e3
  • 1.09e4
  • 1.11e4
  • 1.16e4
  • 1.36e4
  • 1.37e4
  • 1.42e4
91.76
  • 91.76
  • 63.60
  • 62.89
  • 61.29
  • 54.55
  • 54.00
  • 52.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.52
  • 91.52
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.58e3
  • 2.58e3
  • 1.05e4
91.38
  • 91.38
  • 64.89
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.61e3
  • 2.61e3
91.25
  • 91.25
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
2.63e3
  • 2.63e3
  • 3.82e3
  • 5.03e3
91.19
  • 91.19
  • 87.22
  • 83.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.67e3
  • 2.67e3
91.07
  • 91.07
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
  • 5.52e3
89.71
  • 89.71
  • 81.51
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
3.42e3
  • 3.42e3
  • 3.60e3
  • 6.29e3
  • 8.54e3
  • 1.02e4
  • 1.15e4
  • 1.44e4
88.54
  • 88.54
  • 87.95
  • 78.92
  • 71.39
  • 65.80
  • 61.56
  • 51.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.76e3
  • 3.76e3
  • 7.63e3
87.41
  • 87.41
  • 74.46
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
86.20
  • 86.20
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.20e3
  • 6.20e3
79.25
  • 79.25
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.85e3
  • 6.85e3
77.06
  • 77.06
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.01e3
  • 8.01e3
73.19
  • 73.19
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.18
  • 71.18
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.91e3
  • 8.91e3
  • 1.18e4
70.18
  • 70.18
  • 60.40
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.59
  • 69.59
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.02e4
  • 1.02e4
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.98
  • 59.98
AEIR
  • AEIR
CL:0000851neuromast mantle cell
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000852neuromast support cell
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000053561 (ms4a17a.11)
ZFINZDB-GENE-050417-157 (ms4a17a.11)
EMBLCR762404
Uniprot/SPTREMBLA5WUU7, A5WUU7_DANRE

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