D. rerio Gene: camk2a - ENSDARG00000053617 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053617
Namecamk2a
Descriptioncalcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
OrganismDanio rerio (zebrafish)
Synonym(s)camk2a1, zgc:112538, zgc:123320

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.60
  • 96.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
2.30e3
  • 2.30e3
  • 3.75e3
  • 4.53e3
  • 1.42e4
92.31
  • 92.31
  • 87.44
  • 84.84
  • 52.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:00072368 cell stage
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
2.42e3
  • 2.42e3
  • 3.28e3
  • 6.79e3
  • 8.30e3
  • 1.03e4
  • 1.28e4
  • 1.50e4
  • 1.50e4
91.91
  • 91.91
  • 89.02
  • 77.27
  • 72.21
  • 65.61
  • 57.18
  • 49.92
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
6.67e3
  • 6.67e3
  • 1.55e4
  • 1.68e4
  • 1.74e4
  • 1.96e4
77.66
  • 77.66
  • 48.01
  • 43.82
  • 41.83
  • 34.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
7.47e3
  • 7.47e3
  • 9.13e3
  • 9.34e3
75.00
  • 75.00
  • 69.43
  • 68.74
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.60e3
  • 7.60e3
  • 1.66e4
74.55
  • 74.55
  • 44.28
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.76
  • 65.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.47
  • 65.47
AEIR
  • AEIR
UBERON:0001945superior colliculus
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000037Larval:Day 5
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
1.29e4
  • 1.29e4
  • 1.49e4
56.65
  • 56.65
  • 49.99
AEIR
  • AEIR
  • AEIR
UBERON:0002533post-anal tail bud
  • ZFS:0000025Segmentation:10-13 somites
1.33e4
  • 1.33e4
55.53
  • 55.53
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000029Pharyngula:Prim-5
1.37e4
  • 1.37e4
54.13
  • 54.13
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.30
  • 46.30
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.82
  • 45.82
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.47
  • 43.47
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.85
  • 35.85
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.33
  • 34.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000053617 (camk2a)
Uniprot/SPTREMBLE7F2G0, E7F2G0_DANRE, I3IT67, I3IT67_DANRE
ZFINZDB-GENE-051113-72 (camk2a)

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