D. rerio Gene: zgc:162948 - ENSDARG00000053695 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053695
Namezgc:162948
Descriptionzgc:162948 [Source:ZFIN;Acc:ZDB-GENE-070424-46]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.88e3
  • 1.88e3
  • 1.47e4
93.70
  • 93.70
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.34e3
  • 3.34e3
88.82
  • 88.82
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.65e3
  • 3.65e3
  • 5.21e3
87.78
  • 87.78
  • 82.55
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.81e3
  • 3.81e3
  • 5.87e3
87.25
  • 87.25
  • 80.36
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.38
  • 85.38
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.77
  • 81.77
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
81.22
  • 81.22
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.12e3
  • 6.12e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.23e3
  • 6.23e3
79.15
  • 79.15
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
7.13e3
  • 7.13e3
  • 1.40e4
  • 1.45e4
  • 1.47e4
76.12
  • 76.12
  • 53.03
  • 51.57
  • 50.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.13e3
  • 8.13e3
  • 1.38e4
72.77
  • 72.77
  • 53.77
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.17e3
  • 8.17e3
  • 1.47e4
72.65
  • 72.65
  • 50.66
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
72.61
  • 72.61
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.75
  • 71.75
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
8.58e3
  • 8.58e3
  • 8.64e3
  • 1.17e4
  • 1.17e4
  • 1.24e4
71.27
  • 71.27
  • 71.06
  • 60.85
  • 60.80
  • 58.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
9.16e3
  • 9.16e3
  • 1.11e4
69.31
  • 69.31
  • 63.00
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
  • 1.13e4
65.14
  • 65.14
  • 62.15
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.94
  • 64.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.50
  • 63.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.04
  • 61.04
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.67
  • 60.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.59
  • 60.59
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.25e4
  • 1.25e4
58.18
  • 58.18
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.87
  • 57.87
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.41
  • 57.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.52
  • 43.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCABZ01063884
EnsemblENSDARG00000053695 (zgc:162948)
Uniprot/SPTREMBLF1QP14, F1QP14_DANRE
ZFINZDB-GENE-070424-46 (zgc:162948)

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