D. rerio Gene: NAIF1 (1 to many) - ENSDARG00000053716 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053716
NameNAIF1 (1 to many)
Descriptionzgc:153990 [Source:ZFIN;Acc:ZDB-GENE-061013-144]
OrganismDanio rerio (zebrafish)
Synonym(s)ba379c10.2, c9orf90, dkfzp762g199

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.58e3
  • 2.58e3
  • 2.67e3
  • 5.43e3
  • 1.36e4
91.37
  • 91.37
  • 91.07
  • 81.82
  • 54.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.76e3
  • 2.76e3
90.77
  • 90.77
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
3.03e3
  • 3.03e3
  • 4.36e3
  • 4.57e3
  • 5.62e3
  • 5.75e3
  • 7.34e3
  • 8.28e3
  • 8.56e3
  • 8.59e3
  • 1.02e4
89.87
  • 89.87
  • 85.39
  • 84.71
  • 81.19
  • 80.76
  • 75.44
  • 72.27
  • 71.35
  • 71.25
  • 65.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
3.15e3
  • 3.15e3
  • 4.09e3
  • 4.13e3
  • 4.70e3
  • 6.47e3
89.45
  • 89.45
  • 86.31
  • 86.18
  • 84.27
  • 78.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.21e3
  • 3.21e3
89.24
  • 89.24
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.30e3
  • 3.30e3
88.94
  • 88.94
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
3.56e3
  • 3.56e3
  • 4.01e3
  • 5.98e3
  • 6.76e3
  • 6.88e3
  • 7.03e3
  • 7.54e3
  • 7.84e3
  • 7.91e3
  • 7.94e3
  • 7.94e3
  • 1.01e4
  • 1.03e4
  • 1.09e4
  • 1.15e4
  • 1.40e4
  • 1.45e4
  • 1.49e4
88.10
  • 88.10
  • 86.56
  • 79.96
  • 77.37
  • 76.98
  • 76.47
  • 74.74
  • 73.74
  • 73.52
  • 73.43
  • 73.42
  • 66.27
  • 65.55
  • 63.37
  • 61.43
  • 53.03
  • 51.56
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.70e3
  • 3.70e3
87.63
  • 87.63
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.89e3
  • 3.89e3
86.96
  • 86.96
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.78e3
  • 4.78e3
83.99
  • 83.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
4.82e3
  • 4.82e3
  • 4.88e3
  • 4.93e3
  • 6.31e3
  • 6.35e3
  • 7.18e3
83.87
  • 83.87
  • 83.65
  • 83.49
  • 78.89
  • 78.75
  • 75.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.61e3
  • 5.61e3
81.23
  • 81.23
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.82e3
  • 5.82e3
80.53
  • 80.53
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.84e3
  • 5.84e3
80.46
  • 80.46
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
  • 7.92e3
79.93
  • 79.93
  • 73.49
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
  • 9.56e3
79.81
  • 79.81
  • 68.00
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.15e3
  • 6.15e3
79.42
  • 79.42
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.23e3
  • 6.23e3
79.13
  • 79.13
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
  • 8.21e3
77.76
  • 77.76
  • 72.50
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.13
  • 74.13
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.89e3
  • 7.89e3
73.59
  • 73.59
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
73.44
  • 73.44
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.95e3
  • 7.95e3
73.39
  • 73.39
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
  • 1.20e4
72.32
  • 72.32
  • 59.80
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.30e3
  • 8.30e3
72.22
  • 72.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.74e3
  • 8.74e3
70.73
  • 70.73
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
69.96
  • 69.96
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
68.67
  • 68.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.42
  • 67.42
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.48
  • 65.48
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.05e4
  • 1.05e4
  • 1.08e4
  • 1.16e4
65.00
  • 65.00
  • 63.97
  • 61.17
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC124786, BX005407
EnsemblENSDARG00000053716 (NAIF1 (1 to many))
HGNCHGNC:25446 (NAIF1 (1 to many))
Uniprot/SPTREMBLQ1LYD1, Q1LYD1_DANRE
ZFINZDB-GENE-061013-144 (zgc:153990)

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