D. rerio Gene: dcdc2b - ENSDARG00000053744 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053744
Namedcdc2b
Descriptiondoublecortin domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-051113-124]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:123267

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.25e3
  • 2.25e3
  • 1.50e4
92.48
  • 92.48
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.18e3
  • 7.18e3
75.98
  • 75.98
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
  • 1.63e4
  • 1.64e4
64.26
  • 64.26
  • 45.41
  • 44.95
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.33
  • 60.33
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.21e4
  • 1.21e4
59.56
  • 59.56
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.25e4
  • 1.25e4
58.11
  • 58.11
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.30e4
  • 1.30e4
  • 1.36e4
  • 1.43e4
  • 1.46e4
  • 1.46e4
  • 1.49e4
  • 1.51e4
  • 1.51e4
  • 1.67e4
  • 1.78e4
56.40
  • 56.40
  • 54.30
  • 52.08
  • 51.14
  • 51.13
  • 49.95
  • 49.56
  • 49.50
  • 44.08
  • 40.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
  • 1.70e4
56.26
  • 56.26
  • 43.11
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.32e4
  • 1.32e4
  • 1.57e4
55.95
  • 55.95
  • 47.55
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.73
  • 55.73
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.37e4
  • 1.37e4
54.27
  • 54.27
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.37e4
  • 1.37e4
  • 1.43e4
  • 1.57e4
53.98
  • 53.98
  • 52.10
  • 47.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.41e4
  • 1.41e4
52.80
  • 52.80
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
1.47e4
  • 1.47e4
  • 1.61e4
  • 1.67e4
50.85
  • 50.85
  • 46.06
  • 44.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.93
  • 49.93
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.28
  • 48.28
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.86
  • 44.86
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.66e4
  • 1.66e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.42
  • 44.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.71
  • 43.71
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
  • 1.75e4
43.23
  • 43.23
  • 41.44
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.70e4
  • 1.70e4
  • 1.70e4
43.20
  • 43.20
  • 42.91
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.69
  • 42.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.18
  • 41.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000053744 (dcdc2b)
ZFINZDB-GENE-051113-124 (dcdc2b)
EMBLBX284673
Uniprot/SPTREMBLB8A4M4, B8A4M4_DANRE, B8A4M5, B8A4M5_DANRE

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