D. rerio Gene: cpdb - ENSDARG00000053877 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053877
Namecpdb
Descriptioncarboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:152928
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.72e3
  • 2.72e3
90.90
  • 90.90
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.41e3
  • 3.41e3
88.59
  • 88.59
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.19e3
  • 5.19e3
82.62
  • 82.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.57
  • 72.57
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.57e3
  • 8.57e3
71.30
  • 71.30
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.65e3
  • 8.65e3
71.05
  • 71.05
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.43
  • 67.43
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
1.00e4
  • 1.00e4
  • 1.28e4
  • 1.32e4
  • 1.68e4
66.40
  • 66.40
  • 56.98
  • 55.74
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.53
  • 64.53
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.97
  • 61.97
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.16e4
  • 1.16e4
  • 1.16e4
  • 1.26e4
  • 1.30e4
  • 1.31e4
61.29
  • 61.29
  • 61.02
  • 57.85
  • 56.44
  • 56.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.35e4
  • 1.35e4
54.90
  • 54.90
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.47
  • 52.47
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
1.42e4
  • 1.42e4
  • 1.49e4
  • 1.50e4
  • 1.62e4
  • 1.63e4
  • 1.79e4
52.42
  • 52.42
  • 50.25
  • 49.92
  • 45.69
  • 45.47
  • 40.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.57
  • 50.57
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.56e4
  • 1.56e4
47.90
  • 47.90
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
2.32e4
  • 2.32e4
  • 2.42e4
  • 2.56e4
22.18
  • 22.18
  • 18.92
  • 14.12
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.38e4
  • 2.38e4
20.46
  • 20.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.59e4
  • 2.59e4
13.44
  • 13.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eumetazoa3 genesCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000053877.

Cross-references

EnsemblENSDARG00000053877 (cpdb)
ZFINZDB-GENE-060929-1270 (cpdb)
EMBLBX005137
Uniprot/SPTREMBLE7FFQ7, E7FFQ7_DANRE, F1Q723, F1Q723_DANRE

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