D. rerio Gene: sptbn2 - ENSDARG00000053956 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053956
Namesptbn2
Descriptionspectrin, beta, non-erythrocytic 2 [Source:ZFIN;Acc:ZDB-GENE-030131-787]
OrganismDanio rerio (zebrafish)
Synonym(s)fb48h06, si:dkey-99p10.2, wu:fb48h06
Orthologs(s)5 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
1.73e3
  • 1.73e3
  • 2.60e3
  • 5.35e3
  • 5.40e3
  • 5.74e3
94.21
  • 94.21
  • 91.29
  • 82.09
  • 81.93
  • 80.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
2.26e3
  • 2.26e3
  • 4.25e3
92.45
  • 92.45
  • 85.77
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.35e3
  • 2.35e3
92.15
  • 92.15
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.38e3
  • 2.38e3
92.03
  • 92.03
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.70e3
  • 2.70e3
90.97
  • 90.97
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.81e3
  • 2.81e3
  • 4.37e3
90.60
  • 90.60
  • 85.38
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.55e3
  • 3.55e3
  • 7.69e3
88.11
  • 88.11
  • 74.25
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.97e3
  • 3.97e3
86.71
  • 86.71
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.27
  • 86.27
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.80e3
  • 4.80e3
83.93
  • 83.93
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.11e3
  • 5.11e3
82.89
  • 82.89
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.52
  • 82.52
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.00e3
  • 6.00e3
79.92
  • 79.92
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
6.15e3
  • 6.15e3
  • 7.63e3
79.41
  • 79.41
  • 74.47
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.75e3
  • 6.75e3
77.41
  • 77.41
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.93e3
  • 7.93e3
73.44
  • 73.44
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.29e3
  • 9.29e3
68.89
  • 68.89
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.63e3
  • 9.63e3
67.75
  • 67.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.88
  • 62.88
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.76
  • 62.76
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
  • 1.80e4
58.29
  • 58.29
  • 39.66
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.61
  • 57.61
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.39
  • 52.39
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.54
  • 44.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Bilateria3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000053956.

Cross-references

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