D. rerio Gene: npm2b - ENSDARG00000053963 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000053963
Namenpm2b
Descriptionnucleophosmin/nucleoplasmin, 2b [Source:ZFIN;Acc:ZDB-GENE-070410-125]
OrganismDanio rerio (zebrafish)
Synonym(s)npm2, zgc:163013

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
253
  • 253
99.15
  • 99.15
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
519
  • 519
98.27
  • 98.27
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
577
  • 577
98.07
  • 98.07
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
872
  • 872
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
982
  • 982
96.72
  • 96.72
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
996
  • 996
  • 1.01e3
  • 1.05e3
  • 1.29e3
  • 3.34e3
96.67
  • 96.67
  • 96.61
  • 96.50
  • 95.70
  • 88.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.80e3
  • 1.80e3
93.96
  • 93.96
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
1.87e3
  • 1.87e3
  • 3.42e3
  • 3.49e3
  • 3.85e3
  • 3.95e3
  • 5.30e3
93.74
  • 93.74
  • 88.55
  • 88.30
  • 87.09
  • 86.77
  • 82.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.18e3
  • 2.18e3
92.72
  • 92.72
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.81e3
  • 2.81e3
90.59
  • 90.59
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.05e3
  • 4.05e3
86.43
  • 86.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.10e3
  • 4.10e3
86.29
  • 86.29
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
4.15e3
  • 4.15e3
  • 5.35e3
  • 5.66e3
  • 6.19e3
  • 6.71e3
  • 8.70e3
  • 8.96e3
  • 9.79e3
  • 1.42e4
  • 1.49e4
  • 1.54e4
  • 1.56e4
86.09
  • 86.09
  • 82.08
  • 81.04
  • 79.29
  • 77.54
  • 70.88
  • 69.99
  • 67.23
  • 52.56
  • 50.04
  • 48.28
  • 47.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.23e3
  • 4.23e3
85.83
  • 85.83
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.91
  • 78.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
7.59e3
  • 7.59e3
74.59
  • 74.59
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
8.39e3
  • 8.39e3
  • 1.14e4
  • 1.29e4
  • 1.33e4
  • 1.41e4
  • 1.70e4
  • 1.89e4
  • 2.24e4
71.89
  • 71.89
  • 61.82
  • 56.90
  • 55.33
  • 52.81
  • 43.24
  • 36.61
  • 25.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.30
  • 63.30
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.12e4
  • 1.12e4
  • 1.82e4
62.37
  • 62.37
  • 39.03
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.16e4
  • 1.16e4
61.09
  • 61.09
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.21
  • 60.21
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.78
  • 58.78
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.22
  • 54.22
AEIR
  • AEIR
ZFA:0001565oocyte stage II (Danio)
  • ZFS:0000043Juvenile:Days 45-89
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
ZFA:0001566oocyte stage III (Danio)
  • ZFS:0000043Juvenile:Days 45-89
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
ZFA:0001567oocyte stage I (Danio)
  • ZFS:0000043Juvenile:Days 45-89
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 2.24e4
49.88
  • 49.88
  • 25.01
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.06
  • 45.06
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.77e4
  • 1.77e4
  • 1.93e4
40.87
  • 40.87
  • 35.40
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.38
  • 30.38
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.18e4
  • 2.18e4
26.89
  • 26.89
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.59
  • 26.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EnsemblENSDARG00000053963 (npm2b)
ZFINZDB-GENE-070410-125 (npm2b)
EMBLCABZ01080533, CABZ01080534, EU543215
Uniprot/SPTREMBLB2CQD3, B2CQD3_DANRE

Do not show this banner again