D. rerio Gene: pgrmc1 - ENSDARG00000054172 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054172
Namepgrmc1
Descriptionprogesterone receptor membrane component 1 [Source:ZFIN;Acc:ZDB-GENE-041114-91]
OrganismDanio rerio (zebrafish)
Synonym(s)fa94d03, wu:fa94d03, zgc:103577

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
416
  • 416
  • 5.69e3
  • 9.34e3
  • 9.34e3
  • 1.07e4
  • 1.10e4
  • 1.12e4
98.61
  • 98.61
  • 80.94
  • 68.74
  • 68.74
  • 64.27
  • 63.32
  • 62.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
607
  • 607
97.97
  • 97.97
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
766
  • 766
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
846
  • 846
97.17
  • 97.17
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000031Pharyngula:Prim-25
951
  • 951
  • 1.24e3
  • 1.30e3
  • 1.41e3
  • 1.46e3
  • 1.95e3
  • 2.14e3
  • 2.17e3
  • 2.21e3
  • 2.22e3
  • 2.24e3
  • 2.28e3
  • 2.59e3
  • 4.50e3
  • 5.69e3
  • 7.47e3
  • 7.47e3
  • 7.91e3
  • 7.97e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.15e3
  • 8.71e3
  • 8.71e3
  • 8.79e3
  • 9.96e3
  • 9.96e3
  • 1.37e4
96.82
  • 96.82
  • 95.84
  • 95.66
  • 95.27
  • 95.10
  • 93.47
  • 92.85
  • 92.75
  • 92.59
  • 92.56
  • 92.49
  • 92.37
  • 91.32
  • 84.93
  • 80.95
  • 74.99
  • 74.99
  • 73.52
  • 73.32
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 72.72
  • 70.82
  • 70.82
  • 70.57
  • 66.65
  • 66.65
  • 54.15
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.10e3
  • 1.10e3
  • 1.45e3
  • 1.63e3
96.31
  • 96.31
  • 95.15
  • 94.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.25e3
  • 1.25e3
95.83
  • 95.83
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.31e3
  • 1.31e3
95.61
  • 95.61
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
  • 2.00e3
95.23
  • 95.23
  • 93.30
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.43e3
  • 1.43e3
95.20
  • 95.20
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.52e3
  • 1.52e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
1.54e3
  • 1.54e3
  • 1.55e3
  • 1.60e3
  • 1.70e3
  • 1.91e3
  • 1.94e3
  • 2.08e3
  • 2.10e3
  • 2.63e3
  • 3.43e3
94.86
  • 94.86
  • 94.83
  • 94.65
  • 94.32
  • 93.62
  • 93.52
  • 93.05
  • 92.96
  • 91.21
  • 88.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.60e3
  • 1.60e3
  • 1.66e3
  • 1.91e3
  • 2.22e3
  • 2.68e3
  • 3.44e3
94.65
  • 94.65
  • 94.45
  • 93.62
  • 92.58
  • 91.02
  • 88.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.63
  • 94.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.68e3
  • 1.68e3
  • 2.65e3
  • 2.94e3
  • 3.23e3
  • 3.69e3
94.38
  • 94.38
  • 91.13
  • 90.17
  • 89.20
  • 87.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.77e3
  • 1.77e3
94.07
  • 94.07
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.82e3
  • 1.82e3
93.93
  • 93.93
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.95e3
  • 1.95e3
93.48
  • 93.48
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.99e3
  • 1.99e3
93.33
  • 93.33
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.13e3
  • 2.13e3
  • 2.34e3
92.86
  • 92.86
  • 92.17
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.17e3
  • 2.17e3
  • 2.74e3
92.75
  • 92.75
  • 90.82
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.23e3
  • 2.23e3
92.54
  • 92.54
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.32
  • 92.32
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.41e3
  • 2.41e3
  • 2.65e3
91.94
  • 91.94
  • 91.13
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.70e3
  • 2.70e3
90.96
  • 90.96
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.50e3
  • 3.50e3
  • 4.05e3
  • 4.57e3
  • 9.46e3
88.27
  • 88.27
  • 86.46
  • 84.70
  • 68.33
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.52e3
  • 3.52e3
88.22
  • 88.22
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.60e3
  • 3.60e3
87.94
  • 87.94
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.67e3
  • 3.67e3
87.72
  • 87.72
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.78e3
  • 3.78e3
87.35
  • 87.35
AEIR
  • AEIR
UBERON:0001555digestive tract
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
4.27e3
  • 4.27e3
  • 7.47e3
  • 1.03e4
  • 1.07e4
  • 1.15e4
  • 1.17e4
85.71
  • 85.71
  • 75.00
  • 65.61
  • 64.27
  • 61.53
  • 60.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
8.30e3
  • 8.30e3
  • 9.33e3
  • 1.09e4
  • 1.24e4
72.22
  • 72.22
  • 68.74
  • 63.63
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2001076intestinal bulb
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
  • 9.96e3
66.66
  • 66.66
  • 66.66
AEIR
  • AEIR
  • AEIR
UBERON:0003921pancreas primordium
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.15e4
  • 1.15e4
  • 1.22e4
  • 1.24e4
61.53
  • 61.53
  • 59.08
  • 58.32
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBC085558, BC164955, BX842703
EnsemblENSDARG00000054172 (pgrmc1)
Uniprot/SPTREMBLQ5U3G0, Q5U3G0_DANRE
ZFINZDB-GENE-041114-91 (pgrmc1)

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