D. rerio Gene: caprin1b - ENSDARG00000054272 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054272
Namecaprin1b
Descriptioncell cycle associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2020]
OrganismDanio rerio (zebrafish)
Synonym(s)caprin1, fe25d09, gpiap1l, ik:tdsubc_2d9, rng105, wu:fa96f04, wu:fe25d09, wu:fj66h11, xx:tdsubc_2d9, zgc:55902

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
227
  • 227
99.24
  • 99.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
244
  • 244
  • 353
  • 805
  • 2.25e3
  • 3.16e3
99.19
  • 99.19
  • 98.82
  • 97.31
  • 92.46
  • 89.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
252
  • 252
99.16
  • 99.16
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
354
  • 354
98.82
  • 98.82
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
357
  • 357
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
360
  • 360
  • 630
  • 716
  • 1.20e3
  • 1.66e3
  • 1.70e3
98.80
  • 98.80
  • 97.89
  • 97.61
  • 95.98
  • 94.45
  • 94.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
419
  • 419
98.60
  • 98.60
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
498
  • 498
98.34
  • 98.34
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
552
  • 552
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
610
  • 610
97.96
  • 97.96
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
627
  • 627
97.90
  • 97.90
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
630
  • 630
  • 1.01e3
97.89
  • 97.89
  • 96.62
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
646
  • 646
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
732
  • 732
  • 833
  • 883
  • 1.06e3
  • 1.28e3
  • 1.47e3
  • 1.56e3
  • 1.56e3
  • 2.16e3
  • 3.76e3
97.55
  • 97.55
  • 97.21
  • 97.05
  • 96.45
  • 95.72
  • 95.08
  • 94.80
  • 94.78
  • 92.77
  • 87.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
763
  • 763
97.45
  • 97.45
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
775
  • 775
  • 3.36e3
97.41
  • 97.41
  • 88.74
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
795
  • 795
97.34
  • 97.34
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
832
  • 832
  • 1.51e3
  • 2.36e3
97.22
  • 97.22
  • 94.95
  • 92.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
872
  • 872
97.08
  • 97.08
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
879
  • 879
  • 953
97.06
  • 97.06
  • 96.81
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
996
  • 996
96.67
  • 96.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.04e3
  • 1.04e3
96.51
  • 96.51
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.12e3
  • 1.12e3
96.26
  • 96.26
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
96.22
  • 96.22
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
1.43e3
  • 1.43e3
  • 1.53e3
  • 1.56e3
  • 1.57e3
  • 1.74e3
  • 1.88e3
  • 1.88e3
  • 2.28e3
  • 2.38e3
  • 2.42e3
  • 2.59e3
  • 2.60e3
  • 2.73e3
  • 2.94e3
  • 1.25e4
  • 1.31e4
  • 1.41e4
  • 1.49e4
95.22
  • 95.22
  • 94.88
  • 94.80
  • 94.74
  • 94.18
  • 93.71
  • 93.70
  • 92.36
  • 92.02
  • 91.89
  • 91.33
  • 91.28
  • 90.85
  • 90.17
  • 58.10
  • 56.27
  • 52.86
  • 49.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.90e3
  • 1.90e3
93.65
  • 93.65
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.94e3
  • 1.94e3
  • 2.35e3
  • 2.98e3
  • 8.18e3
93.52
  • 93.52
  • 92.13
  • 90.02
  • 72.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
92.68
  • 92.68
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
2.26e3
  • 2.26e3
  • 2.76e3
  • 1.49e4
92.42
  • 92.42
  • 90.78
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.45e3
  • 2.45e3
91.79
  • 91.79
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.59e3
  • 2.59e3
91.32
  • 91.32
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
3.42e3
  • 3.42e3
88.54
  • 88.54
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.46e4
55.16
  • 55.16
  • 51.26
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

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