D. rerio Gene: B3GNT3 (1 to many) - ENSDARG00000054373 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054373
NameB3GNT3 (1 to many)
Descriptionsi:ch211-126g16.10 [Source:ZFIN;Acc:ZDB-GENE-081104-528]
OrganismDanio rerio (zebrafish)
Synonym(s)b3gn-t3, b3gnt-3, beta3gn-t3, hp10328, tmem3
Orthologs(s)28 orthologs
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.07
  • 59.07
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.94
  • 52.94
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.17
  • 51.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.96
  • 49.96
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
47.94
  • 47.94
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.64
  • 47.64
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.64e4
  • 1.64e4
45.16
  • 45.16
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.46
  • 44.46
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
  • 2.32e4
38.85
  • 38.85
  • 22.34
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.83e4
  • 1.83e4
38.66
  • 38.66
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.65
  • 34.65
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
2.02e4
  • 2.02e4
  • 2.19e4
  • 2.38e4
32.31
  • 32.31
  • 26.54
  • 20.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
32.13
  • 32.13
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.22
  • 31.22
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.12e4
  • 2.12e4
  • 2.12e4
28.90
  • 28.90
  • 28.89
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000054373.

Cross-references

EnsemblENSDARG00000054373 (B3GNT3 (1 to many))
HGNCHGNC:13528 (B3GNT3 (1 to many))
ZFINZDB-GENE-081104-528 (si:ch211-126g16.10)
EMBLCR354547
Uniprot/SPTREMBLB0UXE8, B0UXE8_DANRE

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