D. rerio Gene: rhof - ENSDARG00000054389 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054389
Namerhof
Descriptionras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:112017
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
96.00
  • 96.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.28e3
  • 3.28e3
89.03
  • 89.03
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.66
  • 71.66
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.03e3
  • 9.03e3
69.76
  • 69.76
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
  • 1.50e4
69.43
  • 69.43
  • 49.81
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.56
  • 63.56
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.30e4
  • 1.44e4
  • 1.48e4
  • 1.78e4
63.15
  • 63.15
  • 56.46
  • 51.79
  • 50.53
  • 40.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.80
  • 62.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.36
  • 62.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.22e4
  • 1.22e4
58.99
  • 58.99
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.23e4
  • 1.23e4
  • 2.03e4
58.91
  • 58.91
  • 32.05
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.33e4
  • 1.33e4
  • 1.86e4
55.39
  • 55.39
  • 37.61
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.01
  • 55.01
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.35e4
  • 1.35e4
54.81
  • 54.81
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.72
  • 54.72
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.39e4
  • 1.39e4
  • 1.51e4
53.43
  • 53.43
  • 49.29
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.45e4
  • 1.45e4
  • 1.82e4
51.43
  • 51.43
  • 39.17
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.58e4
  • 1.58e4
47.02
  • 47.02
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.76
  • 46.76
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.19
  • 43.19
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.71e4
  • 1.71e4
42.62
  • 42.62
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.10
  • 41.10
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000054389 (rhof)
ZFINZDB-GENE-050522-280 (rhof)
EMBLBX005309, BX088560
Uniprot/SPTREMBLQ1LY78, Q1LY78_DANRE

Do not show this banner again