D. rerio Gene: spata17 - ENSDARG00000054414 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054414
Namespata17
Descriptionspermatogenesis associated 17 [Source:ZFIN;Acc:ZDB-GENE-111214-1]
OrganismDanio rerio (zebrafish)
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
92.55
  • 92.55
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.35
  • 63.35
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.50e4
  • 1.50e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
  • 1.83e4
49.92
  • 49.92
  • 40.56
  • 40.38
  • 40.18
  • 39.42
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.63e4
  • 1.63e4
45.36
  • 45.36
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.65e4
  • 1.65e4
  • 1.75e4
  • 1.77e4
44.64
  • 44.64
  • 41.42
  • 40.83
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.84
  • 40.84
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.83e4
  • 1.83e4
  • 2.05e4
38.61
  • 38.61
  • 31.46
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.84e4
  • 1.84e4
  • 1.89e4
  • 1.99e4
  • 2.07e4
38.27
  • 38.27
  • 36.80
  • 33.29
  • 30.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.99
  • 30.99
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.30
  • 28.30
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.78
  • 27.78
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.64
  • 27.64
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.17
  • 27.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000054414 (spata17)
ZFINZDB-GENE-111214-1 (spata17)
EMBLCR339048, CT030237, FJ358583
Uniprot/SPTREMBLB6VAM9, B6VAM9_DANRE, X1WHE7, X1WHE7_DANRE

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