D. rerio Gene: ssuh2.2 - ENSDARG00000054418 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054418
Namessuh2.2
Descriptionssu-2 homolog, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060421-4694]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-188l8.3, zgc:136895

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
992
  • 992
96.68
  • 96.68
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.30e3
  • 3.30e3
88.94
  • 88.94
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.35
  • 85.35
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.61e3
  • 4.61e3
84.55
  • 84.55
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.53
  • 81.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.33e3
  • 7.33e3
75.47
  • 75.47
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.85e3
  • 7.85e3
73.72
  • 73.72
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.84e3
  • 9.84e3
67.05
  • 67.05
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • UBERON:0004707pharyngula stage
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
9.96e3
  • 9.96e3
  • 1.22e4
  • 1.45e4
  • 1.50e4
66.65
  • 66.65
  • 59.08
  • 51.56
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.97e3
  • 9.97e3
  • 1.48e4
66.62
  • 66.62
  • 50.56
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.50
  • 66.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.92
  • 64.92
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.89
  • 59.89
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.07
  • 58.07
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.28
  • 57.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.58
  • 53.58
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.54e4
  • 1.54e4
48.42
  • 48.42
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.66e4
  • 1.66e4
  • 1.76e4
  • 1.77e4
  • 2.28e4
44.34
  • 44.34
  • 40.95
  • 40.84
  • 23.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.89
  • 43.89
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
2.01e4
  • 2.01e4
  • 2.02e4
32.62
  • 32.62
  • 32.41
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX936290
EnsemblENSDARG00000054418 (ssuh2.2)
Uniprot/SPTREMBLQ1LUM1, Q1LUM1_DANRE
ZFINZDB-GENE-060421-4694 (ssuh2.2)

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