D. rerio Gene: slc7a6 - ENSDARG00000054423 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054423
Nameslc7a6
Descriptionsolute carrier family 7 (amino acid transporter light chain, y+L system), member 6 [Source:ZFIN;Acc:ZDB-GENE-000607-21]
OrganismDanio rerio (zebrafish)
Synonym(s)id:ibd2834
Orthologs(s)1 orthologs
Paralog(s)17 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
2.58e3
  • 2.58e3
  • 3.64e3
91.38
  • 91.38
  • 87.82
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
2.98e3
  • 2.98e3
  • 3.79e3
90.02
  • 90.02
  • 87.30
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.16
  • 86.16
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.31e3
  • 4.31e3
85.56
  • 85.56
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.75
  • 81.75
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000019Gastrula:Shield
6.15e3
  • 6.15e3
79.40
  • 79.40
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.45e3
  • 6.45e3
78.40
  • 78.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.05e3
  • 7.05e3
  • 8.89e3
  • 9.79e3
  • 1.21e4
  • 1.28e4
76.39
  • 76.39
  • 70.24
  • 67.22
  • 59.41
  • 57.06
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.92
  • 75.92
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.37e3
  • 8.37e3
71.97
  • 71.97
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
8.54e3
  • 8.54e3
  • 9.71e3
71.41
  • 71.41
  • 67.48
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.96e3
  • 8.96e3
  • 1.15e4
70.00
  • 70.00
  • 61.54
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
  • 1.40e4
67.25
  • 67.25
  • 53.21
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.85
  • 61.85
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.67
  • 60.67
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.49
  • 60.49
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.09
  • 58.09
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.58
  • 57.58
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.70
  • 56.70
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.20
  • 53.20
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
51.96
  • 51.96
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.44
  • 50.44
AEIR
  • AEIR
UBERON:2000006ball
  • ZFS:0000026Segmentation:14-19 somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.65e4
  • 1.65e4
44.66
  • 44.66
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.67e4
  • 1.67e4
  • 1.77e4
44.05
  • 44.05
  • 40.69
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.70e4
  • 1.70e4
43.11
  • 43.11
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.86
  • 40.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000054423.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata1 geneCompare expression
Chordata2 genesCompare expression
Eumetazoa11 genesCompare expression
Opisthokonta17 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000054423.

Cross-references

EnsemblENSDARG00000054423 (slc7a6)
ZFINZDB-GENE-000607-21 (slc7a6)
EMBLCU464087
Uniprot/SPTREMBLF8W255, F8W255_DANRE

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