D. rerio Gene: her15.2 - ENSDARG00000054560 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054560
Nameher15.2
Descriptionhairy and enhancer of split-related 15, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070627-1]
OrganismDanio rerio (zebrafish)
Synonym(s)fk51a02, her15, her15b, hes5, hes5-like, wu:fk51a02, zgc:136520

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e3
  • 1.42e3
95.26
  • 95.26
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.93e3
  • 2.93e3
  • 7.00e3
90.20
  • 90.20
  • 76.56
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
3.03e3
  • 3.03e3
  • 3.07e3
  • 3.59e3
  • 7.57e3
  • 9.37e3
89.85
  • 89.85
  • 89.71
  • 87.97
  • 74.66
  • 68.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.28e3
  • 4.28e3
  • 1.88e4
85.69
  • 85.69
  • 36.95
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
5.51e3
  • 5.51e3
  • 1.52e4
81.56
  • 81.56
  • 49.12
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
  • 1.44e4
78.76
  • 78.76
  • 51.69
AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
1.11e4
  • 1.11e4
62.90
  • 62.90
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.35
  • 62.35
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.15e4
  • 1.15e4
  • 1.22e4
61.51
  • 61.51
  • 59.08
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
1.18e4
  • 1.18e4
  • 1.44e4
  • 1.45e4
  • 1.47e4
60.42
  • 60.42
  • 51.82
  • 51.51
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.79
  • 56.79
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.01
  • 53.01
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
46.96
  • 46.96
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.75
  • 45.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.74
  • 41.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.64
  • 39.64
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.81e4
  • 1.81e4
39.48
  • 39.48
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.21
  • 37.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.65
  • 30.65
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.27
  • 24.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLAL929185, BC153646
EnsemblENSDARG00000054560 (her15.2)
Uniprot/SPTREMBLA8E5M4, A8E5M4_DANRE
ZFINZDB-GENE-070627-1 (her15.2)

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