D. rerio Gene: cox6a2 - ENSDARG00000054588 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054588
Namecox6a2
Descriptioncytochrome c oxidase subunit VIa polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-040912-129]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:103594

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
62.0
  • 62.0
99.80
  • 99.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
72.0
  • 72.0
99.76
  • 99.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
159
  • 159
99.47
  • 99.47
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
204
  • 204
99.32
  • 99.32
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
325
  • 325
98.92
  • 98.92
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
326
  • 326
98.91
  • 98.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
327
  • 327
98.91
  • 98.91
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
365
  • 365
  • 739
98.78
  • 98.78
  • 97.53
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
391
  • 391
98.69
  • 98.69
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
394
  • 394
98.68
  • 98.68
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
438
  • 438
  • 1.75e4
98.54
  • 98.54
  • 41.31
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
593
  • 593
98.02
  • 98.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
766
  • 766
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.36e3
  • 1.36e3
  • 1.36e4
95.44
  • 95.44
  • 54.45
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.92e3
  • 1.92e3
93.58
  • 93.58
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
3.76e3
  • 3.76e3
  • 1.59e4
  • 1.74e4
  • 1.88e4
  • 2.22e4
87.42
  • 87.42
  • 46.76
  • 41.68
  • 37.07
  • 25.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.91e3
  • 6.91e3
76.88
  • 76.88
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.07e3
  • 8.07e3
72.97
  • 72.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.17
  • 64.17
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.96
  • 58.96
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.76
  • 56.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000054588 (cox6a2)
ZFINZDB-GENE-040912-129 (cox6a2)
EMBLBC081493, BC164442, BX004999
Uniprot/SPTREMBLQ66I77, Q66I77_DANRE

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