D. rerio Gene: cnot6l - ENSDARG00000054597 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054597
Namecnot6l
DescriptionCCR4-NOT transcription complex, subunit 6-like [Source:ZFIN;Acc:ZDB-GENE-050522-302]
OrganismDanio rerio (zebrafish)
Synonym(s)q502n1, zgc:111987

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
554
  • 554
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
696
  • 696
  • 2.40e3
97.67
  • 97.67
  • 91.97
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
716
  • 716
97.61
  • 97.61
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.43
  • 96.43
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.71e3
  • 1.71e3
94.28
  • 94.28
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.73e3
  • 1.73e3
94.20
  • 94.20
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
92.51
  • 92.51
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.27e3
  • 2.27e3
  • 1.16e4
92.40
  • 92.40
  • 61.22
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.30
  • 92.30
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.49e3
  • 2.49e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.81
  • 89.81
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.91
  • 87.91
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.64
  • 87.64
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
3.77e3
  • 3.77e3
  • 3.95e3
  • 6.29e3
  • 7.56e3
  • 8.49e3
87.39
  • 87.39
  • 86.79
  • 78.94
  • 74.67
  • 71.56
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.22e3
  • 4.22e3
85.89
  • 85.89
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.29e3
  • 4.29e3
  • 5.52e3
85.64
  • 85.64
  • 81.53
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.13e3
  • 7.13e3
  • 1.46e4
  • 1.47e4
  • 1.50e4
76.12
  • 76.12
  • 51.01
  • 50.68
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.75e3
  • 7.75e3
74.05
  • 74.05
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
7.76e3
  • 7.76e3
  • 8.29e3
74.02
  • 74.02
  • 72.25
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
8.32e3
  • 8.32e3
  • 9.21e3
72.14
  • 72.14
  • 69.15
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.49e3
  • 9.49e3
68.21
  • 68.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.75e3
  • 9.75e3
67.34
  • 67.34
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.01e4
  • 1.01e4
66.34
  • 66.34
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.25
  • 64.25
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
64.19
  • 64.19
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.23
  • 58.23
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.94
  • 49.94
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC095634, BX640512
EnsemblENSDARG00000054597 (cnot6l)
Uniprot/SWISSPROTA2BHJ4, CNO6L_DANRE
ZFINZDB-GENE-050522-302 (cnot6l)

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