D. rerio Gene: si:dkey-166k12.1 - ENSDARG00000054690 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054690
Namesi:dkey-166k12.1
Descriptionsi:dkey-166k12.1 [Source:ZFIN;Acc:ZDB-GENE-120215-78]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
7.45e3
  • 7.45e3
  • 8.62e3
75.06
  • 75.06
  • 71.13
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.53e4
  • 1.53e4
  • 1.65e4
  • 1.66e4
  • 1.72e4
  • 1.73e4
48.93
  • 48.93
  • 44.78
  • 44.41
  • 42.26
  • 42.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.76
  • 43.76
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
  • 2.19e4
41.62
  • 41.62
  • 26.62
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.78e4
  • 1.78e4
  • 1.86e4
40.47
  • 40.47
  • 37.65
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.93
  • 37.93
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
  • 2.12e4
34.50
  • 34.50
  • 28.89
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.59
  • 24.59
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000054690 (si:dkey-166k12.1)
ZFINZDB-GENE-120215-78 (si:dkey-166k12.1)
EMBLBX571688, BX950855
Uniprot/SPTREMBLE7FBR6, E7FBR6_DANRE

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