D. rerio Gene: si:ch211-244e12.7 - ENSDARG00000054744 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054744
Namesi:ch211-244e12.7
Descriptionsi:ch211-244e12.7 [Source:ZFIN;Acc:ZDB-GENE-131127-278]
OrganismDanio rerio (zebrafish)
Orthologs(s)2 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.47
  • 49.47
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
1.58e4
  • 1.58e4
47.17
  • 47.17
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.11
  • 47.11
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.62e4
  • 1.62e4
  • 2.43e4
45.78
  • 45.78
  • 18.53
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
2.18e4
  • 2.18e4
26.89
  • 26.89
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.73e4
  • 2.73e4
8.60
  • 8.60
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi2 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000054744.

Cross-references

EnsemblENSDARG00000054744 (si:ch211-244e12.7)
ZFINZDB-GENE-131127-278 (si:ch211-244e12.7)
EMBLAL928851
Uniprot/SPTREMBLE7FB44, E7FB44_DANRE, X1WEL8, X1WEL8_DANRE

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