D. rerio Gene: tp53bp2b - ENSDARG00000054858 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054858
Nametp53bp2b
Descriptiontumor protein p53 binding protein, 2b [Source:ZFIN;Acc:ZDB-GENE-050208-453]
OrganismDanio rerio (zebrafish)
Synonym(s)aspp2b, si:dkeyp-34c12.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000014Blastula:Sphere
  • UBERON:0000068embryo stage
1.54e3
  • 1.54e3
  • 1.66e3
  • 4.41e3
  • 7.03e3
  • 7.47e3
  • 8.96e3
  • 1.50e4
94.85
  • 94.85
  • 94.45
  • 85.22
  • 76.46
  • 74.99
  • 69.99
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.21e3
  • 3.21e3
89.25
  • 89.25
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.54e3
  • 4.54e3
84.80
  • 84.80
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
  • 6.08e3
82.23
  • 82.23
  • 79.65
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.80e3
  • 5.80e3
80.60
  • 80.60
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
5.88e3
  • 5.88e3
80.33
  • 80.33
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
79.50
  • 79.50
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.86e3
  • 6.86e3
  • 7.72e3
77.02
  • 77.02
  • 74.16
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
7.95e3
  • 7.95e3
  • 8.22e3
  • 1.13e4
  • 1.20e4
  • 1.24e4
73.37
  • 73.37
  • 72.49
  • 62.31
  • 59.67
  • 58.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.30e3
  • 8.30e3
72.21
  • 72.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
8.88e3
  • 8.88e3
  • 1.50e4
70.26
  • 70.26
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.83e3
  • 9.83e3
67.09
  • 67.09
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.82
  • 65.82
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.23
  • 65.23
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.06e4
  • 1.06e4
  • 1.08e4
64.62
  • 64.62
  • 63.97
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.07e4
  • 1.07e4
  • 1.28e4
64.32
  • 64.32
  • 57.00
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.44
  • 62.44
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.28
  • 62.28
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.02
  • 62.02
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.46
  • 59.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.37
  • 58.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.04
  • 57.04
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.67
  • 50.67
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.51
  • 44.51
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX321898
EnsemblENSDARG00000054858 (tp53bp2b)
Uniprot/SPTREMBLF1QWN1, F1QWN1_DANRE, Q1LXN7, Q1LXN7_DANRE
ZFINZDB-GENE-050208-453 (tp53bp2b)

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