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D. rerio Gene: rgra - ENSDARG00000054890 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054890
Namergra
Descriptionretinal G protein coupled receptor a [Source:ZFIN;Acc:ZDB-GENE-040924-6]
OrganismDanio rerio (zebrafish)
Synonym(s)rgr, rgr1, zgc:110660, zgc:110660gn
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.96e3
  • 1.96e3
  • 7.47e3
  • 7.47e3
  • 9.96e3
  • 1.04e4
93.44
  • 93.44
  • 74.99
  • 74.98
  • 66.65
  • 65.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
2.13e3
  • 2.13e3
  • 3.94e3
92.88
  • 92.88
  • 86.81
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.31e3
  • 3.31e3
  • 1.16e4
88.92
  • 88.92
  • 61.23
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
4.26e3
  • 4.26e3
  • 8.22e3
  • 1.02e4
  • 1.15e4
  • 1.23e4
85.74
  • 85.74
  • 72.48
  • 65.70
  • 61.53
  • 58.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001905pineal body
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
5.60e3
  • 5.60e3
  • 6.97e3
  • 7.08e3
  • 9.96e3
  • 1.03e4
  • 1.03e4
  • 1.07e4
  • 1.08e4
  • 1.28e4
81.25
  • 81.25
  • 76.66
  • 76.30
  • 66.65
  • 65.61
  • 65.61
  • 64.26
  • 63.87
  • 57.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.21e3
  • 7.21e3
75.87
  • 75.87
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.38e3
  • 7.38e3
75.28
  • 75.28
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
7.93e3
  • 7.93e3
73.44
  • 73.44
AEIR
  • AEIR
UBERON:2000088YSL
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
8.96e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 9.96e3
69.99
  • 69.99
  • 69.99
  • 69.99
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007135neural keel
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
9.96e3
  • 9.96e3
  • 1.12e4
  • 1.19e4
66.67
  • 66.67
  • 62.50
  • 60.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.69
  • 44.69
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.29
  • 42.29
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.45
  • 30.45
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.11
  • 25.11
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.63
  • 21.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

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