D. rerio Gene: ldlrad4 - ENSDARG00000054941 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000054941
Nameldlrad4
Descriptionlow density lipoprotein receptor class A domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-091230-3]
OrganismDanio rerio (zebrafish)
Synonym(s)gb:al921110, si:dkey-199k9.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.67
  • 86.67
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.68e3
  • 4.68e3
84.34
  • 84.34
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.92e3
  • 5.92e3
  • 1.03e4
80.18
  • 80.18
  • 65.41
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.20e3
  • 7.20e3
75.89
  • 75.89
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.55e3
  • 8.55e3
71.39
  • 71.39
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.21e3
  • 9.21e3
69.17
  • 69.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
9.44e3
  • 9.44e3
  • 1.58e4
  • 1.66e4
  • 1.80e4
  • 1.90e4
68.40
  • 68.40
  • 47.19
  • 44.51
  • 39.81
  • 36.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.66e3
  • 9.66e3
67.67
  • 67.67
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
  • 1.28e4
65.66
  • 65.66
  • 57.20
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.10e4
  • 1.10e4
63.26
  • 63.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.57
  • 59.57
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.27e4
  • 1.27e4
57.31
  • 57.31
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.66
  • 55.66
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.57
  • 55.57
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.08
  • 55.08
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.84
  • 53.84
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.39e4
  • 1.39e4
  • 1.88e4
53.46
  • 53.46
  • 36.95
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.41
  • 53.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.63
  • 48.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.67
  • 45.67
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.99
  • 44.99
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.30
  • 41.30
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.59
  • 34.59
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.36
  • 30.36
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX005347
EnsemblENSDARG00000054941 (ldlrad4)
Uniprot/SPTREMBLE7FDX6, E7FDX6_DANRE, E9QGX8, E9QGX8_DANRE
ZFINZDB-GENE-091230-3 (ldlrad4)

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