D. rerio Gene: lrfn4a - ENSDARG00000055132 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055132
Namelrfn4a
Descriptionleucine rich repeat and fibronectin type III domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-091113-56]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-250a23.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.66e3
  • 2.66e3
91.10
  • 91.10
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.13e3
  • 4.13e3
86.16
  • 86.16
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
6.82e3
  • 6.82e3
  • 1.05e4
  • 1.57e4
  • 1.64e4
  • 1.95e4
77.17
  • 77.17
  • 64.96
  • 47.46
  • 45.15
  • 34.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.72e3
  • 8.72e3
  • 1.49e4
70.80
  • 70.80
  • 50.07
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.64
  • 63.64
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.72e4
  • 1.72e4
42.29
  • 42.29
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.21
  • 40.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.50
  • 36.50
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.52
  • 35.52
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.03e4
  • 2.03e4
31.99
  • 31.99
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.22e4
  • 2.22e4
25.65
  • 25.65
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX465183
EnsemblENSDARG00000055132 (lrfn4a)
Uniprot/SPTREMBLE9QF02, E9QF02_DANRE, X1WFK5, X1WFK5_DANRE
ZFINZDB-GENE-091113-56 (lrfn4a)

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