D. rerio Gene: pxdc1a - ENSDARG00000055177 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055177
Namepxdc1a
DescriptionPX domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-070912-381]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-154p10.4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
598
  • 598
98.00
  • 98.00
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.08e3
  • 3.08e3
  • 7.56e3
89.70
  • 89.70
  • 74.68
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
8.55e3
  • 8.55e3
  • 1.80e4
  • 2.06e4
  • 2.19e4
  • 2.38e4
71.37
  • 71.37
  • 39.82
  • 31.04
  • 26.57
  • 20.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.21e4
  • 1.21e4
  • 1.99e4
59.65
  • 59.65
  • 33.38
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.84
  • 49.84
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.54e4
  • 1.54e4
48.41
  • 48.41
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.55e4
  • 1.55e4
48.10
  • 48.10
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.01
  • 38.01
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.37
  • 33.37
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.11e4
  • 2.11e4
29.25
  • 29.25
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.27
  • 26.27
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
26.16
  • 26.16
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.67
  • 24.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.44e4
  • 2.44e4
18.21
  • 18.21
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX323807
EnsemblENSDARG00000055177 (pxdc1a)
Uniprot/SPTREMBLE7FAZ4, E7FAZ4_DANRE, F1R596, F1R596_DANRE
ZFINZDB-GENE-070912-381 (pxdc1a)

Do not show this banner again