D. rerio Gene: si:ch211-132b12.8 - ENSDARG00000055250 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000055250
Namesi:ch211-132b12.8
Descriptionsi:ch211-132b12.8 [Source:ZFIN;Acc:ZDB-GENE-030131-5453]
OrganismDanio rerio (zebrafish)
Synonym(s)fd19c03, wu:fd19c03, wu:fi23b01

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
56.1
  • 56.1
  • 124
  • 162
  • 1.33e3
  • 1.59e3
99.82
  • 99.82
  • 99.59
  • 99.46
  • 95.54
  • 94.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
188
  • 188
  • 8.58e3
99.37
  • 99.37
  • 71.26
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
250
  • 250
99.17
  • 99.17
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
386
  • 386
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
454
  • 454
98.48
  • 98.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
858
  • 858
97.13
  • 97.13
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.06e3
  • 1.06e3
96.46
  • 96.46
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.44
  • 95.44
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000068embryo stage
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000104life cycle
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.63e3
  • 1.63e3
  • 6.79e3
  • 1.15e4
  • 1.25e4
  • 1.33e4
  • 1.36e4
  • 1.41e4
  • 1.57e4
  • 1.57e4
  • 1.59e4
  • 1.61e4
  • 1.64e4
  • 1.68e4
94.53
  • 94.53
  • 77.26
  • 61.60
  • 58.15
  • 55.46
  • 54.33
  • 52.86
  • 47.39
  • 47.28
  • 46.77
  • 46.15
  • 45.10
  • 43.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.78e3
  • 1.78e3
94.04
  • 94.04
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.05e3
  • 2.05e3
93.15
  • 93.15
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.28
  • 92.28
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.03
  • 90.03
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
3.10e3
  • 3.10e3
  • 5.73e3
  • 8.43e3
  • 1.08e4
  • 1.16e4
  • 1.54e4
89.63
  • 89.63
  • 80.83
  • 71.76
  • 63.96
  • 61.17
  • 48.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.03e3
  • 4.03e3
86.49
  • 86.49
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
  • 9.69e3
70.14
  • 70.14
  • 67.54
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.52e3
  • 9.52e3
  • 1.49e4
68.12
  • 68.12
  • 49.96
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.19e4
60.61
  • 60.61
  • 60.24
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.02
  • 54.02
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.49
  • 53.49
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.95
  • 50.95
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
1.52e4
  • 1.52e4
  • 1.57e4
  • 1.58e4
  • 2.14e4
  • 2.25e4
  • 2.25e4
  • 2.28e4
  • 2.37e4
49.08
  • 49.08
  • 47.34
  • 47.13
  • 28.45
  • 24.68
  • 24.57
  • 23.81
  • 20.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.61e4
  • 1.61e4
  • 1.83e4
46.21
  • 46.21
  • 38.73
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.81
  • 41.81
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.74e4
  • 1.74e4
  • 1.99e4
41.58
  • 41.58
  • 33.22
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.86
  • 36.86
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.48
  • 36.48
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.35
  • 25.35
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX664607
EnsemblENSDARG00000055250 (si:ch211-132b12.8)
Uniprot/SPTREMBLQ1LVI4, Q1LVI4_DANRE
ZFINZDB-GENE-030131-5453 (si:ch211-132b12.8)

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